PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc010058.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family B3
Protein Properties Length: 457aa    MW: 51590.2 Da    PI: 9.4665
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc010058.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B360.33.2e-19106193298
                            EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
                     B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                            +k+++ s v++  ++ lp +f++++  +  ++ t +le+e+g++Wevk+    ++  + l++GWk+Fv a+ L egD+++F+l+++++
  Cse_sc010058.1_g010.1 106 IKTMVYSQVTSGFWMGLPLHFCKKYL-P--KDATFVLENEKGEQWEVKY--IAYK--VGLSAGWKHFVFAHSLVEGDVLIFQLVESTK 186
                            6999*********************4.3..4569***************..5555..44***********************998777 PP

                            E..EEEEE- CS
                     B3  90 felvvkvfr 98 
                            f  ++ +f+
  Cse_sc010058.1_g010.1 187 F--KIYIFK 193
                            7..888876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 457 aa     Download sequence    
MSSPVATEPK QNSDPIHQRP SLSKRKKSKP IRFEVSDVQK QSQSSSPPKK IKKLKIIRSA  60
HSSSYLSFRK QKSTTKVGKD PVPASSAMVR AEEFQSRLGT EFPSCIKTMV YSQVTSGFWM  120
GLPLHFCKKY LPKDATFVLE NEKGEQWEVK YIAYKVGLSA GWKHFVFAHS LVEGDVLIFQ  180
LVESTKFKIY IFKENESNEV DGALSLLNLE AQAQPEQQMT PGKIKRNKDP GSLSSTMVQK  240
KQKNSAPAQL SGHSGNNSEE AGSEVLEGSR FCIQAVSFEE VKSFEDFHIV VKGLCIDREL  300
PDDVRMRYYN LCSDKKQYLH DGLPESLYHK LVVGIIGELV SIADKIKNCK LTTTKEEFER  360
WDNSLKSFKL LGMNVDFLRD RMHALKALVL ESEGAVDIMK YVEAEKQHAF VENEVTKTAS  420
KLKELKGSAK KLEGVMGPLK QIAEKYEHKL REEADAP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12455KRKKSKPIRFEVSDVQKQSQSSSPPKKIKKLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.11e-32B3 family protein