PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc009758.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Protein Properties

Length: 437aa MW: 49324.9 Da PI: 6.2086

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc009758.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	55.9	8e-18	92	182	1	99
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f+k ++ps+v++ +l lpk+f+++h + + ++t++l de+ ++++ k+ ++ l++GW++F a++L +gD +vF+l++ Cse_sc009758.1_g030.1 92 FVKLMLPSHVTRYFCLGLPKNFCDAHL-P-KDDVTVVLVDEDDQEFNTKY--LDRKT--GLSGGWRGFSIAHKLLAGDALVFQLIE-- 171 89**********************4.2.3679************..44433..39********************986.. PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 + +++v ++r+ Cse_sc009758.1_g030.1 172 QWKMKVYIVRA 182 55567877775 PP

Sequence ? help Back to Top
Protein Sequence Length: 437 aa Download sequence
MAIGPQSKPR DTSPVSALDV KKKALEIKKN IARKKTTNPK PKVNFDLSRN LIVSYDPKMA 60 ALAQPLNSQS KSSSIERANE VQASLPSELP SFVKLMLPSH VTRYFCLGLP KNFCDAHLPK 120 DDVTVVLVDE DDQEFNTKYL DRKTGLSGGW RGFSIAHKLL AGDALVFQLI EQWKMKVYIV 180 RASGLNEIDG ALDLLNLVPC DMKVYQHQNN KDASNLQRAE NMDIDLHQDN GLIMYDQSVD 240 DTEYADSPVS EGLRLSQSVI EFKDIKGVDD FSIVVDNLVI DSEIPKHFQI KYYDLCRSQN 300 MYLHENLLKG LNVKLAVGII LETVTIADAI RACKVTIIRD DIGTWDKTLK AFEEVGMKVG 360 FLRARISKLM GLLFESNEIL EAKRIEQVKA EEEMRVIKEK LCGVREVIKN LDVEMETLKL 420 KGQKLEPVFD KEANAPW

Sequence ? help Back to Top

Protein Sequence Length: 437 aa Download sequence

MAIGPQSKPR DTSPVSALDV KKKALEIKKN IARKKTTNPK PKVNFDLSRN LIVSYDPKMA  60
ALAQPLNSQS KSSSIERANE VQASLPSELP SFVKLMLPSH VTRYFCLGLP KNFCDAHLPK  120
DDVTVVLVDE DDQEFNTKYL DRKTGLSGGW RGFSIAHKLL AGDALVFQLI EQWKMKVYIV  180
RASGLNEIDG ALDLLNLVPC DMKVYQHQNN KDASNLQRAE NMDIDLHQDN GLIMYDQSVD  240
DTEYADSPVS EGLRLSQSVI EFKDIKGVDD FSIVVDNLVI DSEIPKHFQI KYYDLCRSQN  300
MYLHENLLKG LNVKLAVGII LETVTIADAI RACKVTIIRD DIGTWDKTLK AFEEVGMKVG  360
FLRARISKLM GLLFESNEIL EAKRIEQVKA EEEMRVIKEK LCGVREVIKN LDVEMETLKL  420
KGQKLEPVFD KEANAPW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	5e-31	B3 family protein