PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc009457.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 352aa    MW: 39336.6 Da    PI: 8.6223
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc009457.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.94.3e-0975122354
                            HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                    HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                              +  rE++RRdr+N+ f eL + l +      +K +Ka+iL  +++ +++L
  Cse_sc009457.1_g010.1  75 LQKADREKQRRDRLNEQFTELGKTLDPE----RPKFDKATILGDTIQMLNDL 122
                            56778*******************9987....69*************99988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    
MHINRVKVDP NKTSGYIHLQ TCWIRYKPSH THRNRINQSV NEMEDNKFHL VPFDNNNNTS  60
ITQSRPGPEP KDRKLQKADR EKQRRDRLNE QFTELGKTLD PERPKFDKAT ILGDTIQMLN  120
DLTAQVSRLK SEYTILTEES RELTQEKHDL REEKASLKSD IESLNLQYQQ RVRAMYPWGH  180
MDQSVLMHPP SYPYPVPMQM PMPPGSIPMH PSIQPYPFFG SQNPGVVSNP GSAFFPSVQY  240
VSPVVQTSTR SQVSSRQGSR NKSSEQGENG SGKDGDSIDV ATELELKTPG STGDQDGSPG  300
QPKPKKLHRK ETSFSDENSA SGCASSHTVQ ASSSTSVIGG ANGDHQRSAS PP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.13e-69bHLH family protein