PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc008870.1_g070.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | B3 | ||||||||
Protein Properties | Length: 151aa MW: 17880.4 Da PI: 10.1326 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 68.6 | 8.7e-22 | 28 | 111 | 9 | 99 |
HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 d ++++ ++p +f++++++k +kt++l+d+sgr+W v +k+ +++++++GW++Fv++n L+ g f+vF++++ ++++++v++ Cse_sc008870.1_g070.1 28 DRTSHQ--MIPPEFLKHFEQK--IPKTIILKDLSGRVWHVDT--KKRNNGVFMENGWNRFVNDNTLELGQFMVFRYSK-QSTTFTVRI 108 444444..99*****777655..889****************..999999**************************98.555569999 PP E-S CS B3 97 frk 99 f + Cse_sc008870.1_g070.1 109 FGR 111 976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 151 aa Download sequence |
MIKRGRDRPQ EVPVINQDPE FFDIFLPDRT SHQMIPPEFL KHFEQKIPKT IILKDLSGRV 60 WHVDTKKRNN GVFMENGWNR FVNDNTLELG QFMVFRYSKQ STTFTVRIFG RDACKSEDQA 120 SEKPLIRVKD EEESDQHSTP IHQPKRKRGK P |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 144 | 151 | PKRKRGKP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66980.1 | 1e-23 | B3 family protein |