PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc008610.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NAC
Protein Properties Length: 310aa    MW: 36090.6 Da    PI: 7.8841
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc008610.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM162.51.6e-50271523128
                    NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 
                            pGfrFhP deelv +yL++kv++k+++l e ike+diyk++PwdLpk  +++ekewyfF++r +ky+++ r+nr+t sg+Wkatg d+
  Cse_sc008610.1_g020.1  27 PGFRFHPLDEELVGFYLQRKVAKKPISL-ELIKEIDIYKYDPWDLPKGSNGGEKEWYFFCRRGRKYRNSIRPNRVTGSGFWKATGIDR 113
                            9***************************.99***************9989999*********************************** PP

                    NAM  91 evlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                            +v+s+ +++ +glkk+Lv+y+g+a kg+kt+W+mhe+rl
  Cse_sc008610.1_g020.1 114 PVYSSdESKCIGLKKSLVYYRGSAGKGTKTEWMMHEFRL 152
                            ****966777***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MDTQKQLSKN SICNRELVDH DEDVPLPGFR FHPLDEELVG FYLQRKVAKK PISLELIKEI  60
DIYKYDPWDL PKGSNGGEKE WYFFCRRGRK YRNSIRPNRV TGSGFWKATG IDRPVYSSDE  120
SKCIGLKKSL VYYRGSAGKG TKTEWMMHEF RLPPQSDIHN NKKHMDDKSV AQEAEVWTLC  180
RILKRSPCYK KTLPEWREVS TRKPQQVVVE TSSGDSDYDM QSYISFQTPI INEKKPFLYN  240
HRQQHHHETN QFIVGQATAS TLTHDQPPST EASCSSFSNV DVNEFIKHGD WDDLRSVVDQ  300
FSGTDPFFYM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.12e-89NAC family protein