PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc008420.1_g030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MYB_related | ||||||||
Protein Properties | Length: 227aa MW: 26438.6 Da PI: 10.2015 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 34.2 | 6.1e-11 | 24 | 75 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqky 47 ++rWT +E+ l+ +v+++G+g W+ I + k R+ ++k++w+++ Cse_sc008420.1_g030.1 24 KKRWTLDEESALIAGVRKYGMGKWRDILSDQLiseclKDRSNVDLKDKWRNL 75 68********************9999987777778888************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence |
MFHFFLHTNT QKPYYLSAQM GKQKKRWTLD EESALIAGVR KYGMGKWRDI LSDQLISECL 60 KDRSNVDLKD KWRNLCANVG YLTLVAEPYH HLQMEDKWQN LGDNVAVLPQ DTKPVPKVVA 120 TTRPKIRLWR IIMIITVIII IGCVMKSHWK LLYLLPPIKM LWVEICDMTP AKLIKKWKDL 180 RRSTRTACLG SADGMAFCWI EVLFCKVIYG RMIFVGKFRK LGASYSP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G17520.1 | 5e-20 | MYB_related family protein |