PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc008120.1_g070.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

GRF

Protein Properties

Length: 381aa MW: 41455 Da PI: 7.8324

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc008120.1_g070.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	76.1	3.6e-24	134	177	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+ep+rCrRtDGKkWRCsr+ ++++k+CErH h++r rsrk++e Cse_sc008120.1_g070.1 134 DPEPWRCRRTDGKKWRCSRDIIPDQKYCERHSHKSRPRSRKPVE 177 79***************************************987 PP
2	QLQ	50.4	6.8e-18	86	116	2	32
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLl 32 FTaaQ+q+L++Q ++yKy++a+ PvP++Ll Cse_sc008120.1_g070.1 86 IFTAAQWQELERQTMIYKYIMASIPVPANLL 116 5*****************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
MGHGNTRSGG YDDSGKAVAA SFLEADGGVG VGMTMQDTIS SYAYDNKISF IPYYQNDQHH 60 SHFGGGAIFG NQMSIPTTGS DSGKVIFTAA QWQELERQTM IYKYIMASIP VPANLLSTQS 120 NKGVMDLRFS SGSDPEPWRC RRTDGKKWRC SRDIIPDQKY CERHSHKSRP RSRKPVEIQS 180 QNTNITTTSA LNVTPSAPTS YQNSRCPEWF MKSATMPVST SNQQLHQSMN SPRVGSKRTH 240 IFPNKLEGNH PLDTTSSSSV DASIGARRQN FIDAWSRSGE GDNCSLTLSM QCSGGIDDDN 300 VQRLDIGNAD VLKSNSQWLN QASWMSSPPG GPLGEALGLG IASTMKGPMS LPSSHGLITS 360 TTTSTSCENS GSLDQELSFI R

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

MGHGNTRSGG YDDSGKAVAA SFLEADGGVG VGMTMQDTIS SYAYDNKISF IPYYQNDQHH  60
SHFGGGAIFG NQMSIPTTGS DSGKVIFTAA QWQELERQTM IYKYIMASIP VPANLLSTQS  120
NKGVMDLRFS SGSDPEPWRC RRTDGKKWRC SRDIIPDQKY CERHSHKSRP RSRKPVEIQS  180
QNTNITTTSA LNVTPSAPTS YQNSRCPEWF MKSATMPVST SNQQLHQSMN SPRVGSKRTH  240
IFPNKLEGNH PLDTTSSSSV DASIGARRQN FIDAWSRSGE GDNCSLTLSM QCSGGIDDDN  300
VQRLDIGNAD VLKSNSQWLN QASWMSSPPG GPLGEALGLG IASTMKGPMS LPSSHGLITS  360
TTTSTSCENS GSLDQELSFI R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37740.1	2e-28	GRF family protein