PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc007993.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family B3
Protein Properties Length: 270aa    MW: 30759.5 Da    PI: 10.1206
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc007993.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3551.5e-17191001295
                            HTT-EE--HHH.HTT...---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
                     B3  12 ksgrlvlpkkfaeeh...ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                            ++  l lp  fa++h   g++ ++   ++le+ sg +Wevk+   k +++y++ +GW +Fvk+n+L+  DfvvF l++    + +++
  Cse_sc007993.1_g010.1  19 SEVVLPLPSVFAKKHlenGNSVTQ--PIVLETISGDKWEVKY--AKIKDGYYFVDGWFDFVKQNRLEKHDFVVFWLISP-PPKVMFQ 100
                            4445789999******86544445..5***************..******************************99874.3334555 PP
2B340.54.7e-131902563296
                            --SEEEEEETTS-EEEEEE...EEETTE...EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
                     B3  32 esktltledesgrsWevkl.iyrkksgr...yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                              k ++l++  g++ +v++ ++r+++++     lt+GW+eF k+n+++ gD++vF +++r+    +v+v
  Cse_sc007993.1_g010.1 190 VVKRVRLMNDVGKKSKVTItTWRRGPKSvqiPHLTGGWSEFLKDNNVEIGDTCVFNHVKRKLL--HVHV 256
                            445799*************4557777778887799*********************8775444..6655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MNFNKQNGAS FFKILRMESE VVLPLPSVFA KKHLENGNSV TQPIVLETIS GDKWEVKYAK  60
IKDGYYFVDG WFDFVKQNRL EKHDFVVFWL ISPPPKVMFQ VFFYALNECL KEPLTGSNND  120
IRPVAPVDVG DMSDDSGARA GNKPCVVKET NANGSLTNRK LFEKNVCRTY LAYMPLTGDF  180
ERVTGIDCKV VKRVRLMNDV GKKSKVTITT WRRGPKSVQI PHLTGGWSEF LKDNNVEIGD  240
TCVFNHVKRK LLHVHVEKGK KGRRSNKSNQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26680.11e-12B3 family protein