PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc007749.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 271aa    MW: 30566.2 Da    PI: 6.7207
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc007749.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.72.1e-08160207455
                            HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                    HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                            +h+++Er RR +iN+++  L++++P +     k +  a +L + ++Y++sLq
  Cse_sc007749.1_g010.1 160 SHSIAERVRRGKINERLRCLQDIVPGC----YKSMGMAVMLDEIINYVQSLQ 207
                            8*************************8....3569999***********998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MEGFTSSFHS LKPSFSFIDI DQNMELFNQF SIQYDNSSMN TSQSFTGFSN DNFMSQQVLP  60
SFDQQFVQSF QPVFQHEKKN VIVNPEPAPM GPVLNGKRKL MDVSSSSSGN SSSHRVTDCV  120
INDKNFQSSD KGKKAKVSDN GEAPKEVVHV RARRGQATDS HSIAERVRRG KINERLRCLQ  180
DIVPGCYKSM GMAVMLDEII NYVQSLQNQV EFLSSKLSEA SRFHNFDSES MHIDAFQMGN  240
VIEGLKLQRL EENGPVDQSF GPYPSLPYHR T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18400.14e-52bHLH family protein