PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc007709.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family Nin-like
Protein Properties Length: 224aa    MW: 26024.3 Da    PI: 5.2558
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc007709.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK67.32.3e-2170116652
                 RWP-RK   6 sledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                            + e +++y+++pi +AAk+ ++c T+ K+ CR++GI+RWP+Rk++s+
  Cse_sc007709.1_g010.1  70 RREIIAQYYYMPIVKAAKKFNICITIFKKHCRELGIQRWPYRKLTSI 116
                            67889***************************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MITMPDIEDS DAENEMIPAD DVNPTEDKKN KRPEIEYFDV EIEQTPANDD QGEASDPIVK  60
KKTIIRKKTR REIIAQYYYM PIVKAAKKFN ICITIFKKHC RELGIQRWPY RKLTSIQLFI  120
NIIQAENGGA KVDGNTQEII ISLQEEKKRV EENPDLEFTN STKRLRQFYF KSKYKKRKSM  180
SLIMSLTNQP TTSDATQLQY SSENSSSDHE NIEDGYGSDF TQCD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66990.13e-24Nin-like family protein