PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc007498.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

E2F/DP

Protein Properties

Length: 400aa MW: 44187.4 Da PI: 9.0477

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc007498.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	66.5	3.5e-21	3	83	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 rkeksL+lltq+f+kl+ +s+++ ++l+++a++L+ + +++k+RR+YDi+NV++ ++l ek + k++++w g Cse_sc007498.1_g030.1 3 RKEKSLGLLTQNFIKLFITSHDEFISLDTAATTLLGDvhdptAMRTKVRRLYDIANVFQTMDLSEKirhpqNGKPAFSWLG 83 79****************************************************************999999999999987 PP

Sequence ? help Back to Top
Protein Sequence Length: 400 aa Download sequence
NNRKEKSLGL LTQNFIKLFI TSHDEFISLD TAATTLLGDV HDPTAMRTKV RRLYDIANVF 60 QTMDLSEKIR HPQNGKPAFS WLGVKGHPNT KSLALDTSNS IKRAFGTYIT NYTDSKRYRM 120 DSSSDWSSKG VTVAMHRNID CVKFEYDENN TMLQQPQCNS KEFVFGPFTP ATAHRAGTSG 180 KKSGGKFGGL GGLVTCQNWL DQVDLKHYLN NIIIIFNMII KVILLNGFVC KDPKMVKAED 240 FTFKGLDKMG NTSNAVGSIV TTINVNDLPG LNTFGISMVR IDYAPWGQNA PHTHPRATEI 300 LVVIEGSLLV GFVTSNPDNK LFTQHLEKGD VFVFPEGLIH FQQNVGYGNA VAIAALSSQN 360 LGAITITNAV FGSDPKISDD ILAKAFQVEK KVIDKIQSNF

Sequence ? help Back to Top

Protein Sequence Length: 400 aa Download sequence

NNRKEKSLGL LTQNFIKLFI TSHDEFISLD TAATTLLGDV HDPTAMRTKV RRLYDIANVF  60
QTMDLSEKIR HPQNGKPAFS WLGVKGHPNT KSLALDTSNS IKRAFGTYIT NYTDSKRYRM  120
DSSSDWSSKG VTVAMHRNID CVKFEYDENN TMLQQPQCNS KEFVFGPFTP ATAHRAGTSG  180
KKSGGKFGGL GGLVTCQNWL DQVDLKHYLN NIIIIFNMII KVILLNGFVC KDPKMVKAED  240
FTFKGLDKMG NTSNAVGSIV TTINVNDLPG LNTFGISMVR IDYAPWGQNA PHTHPRATEI  300
LVVIEGSLLV GFVTSNPDNK LFTQHLEKGD VFVFPEGLIH FQQNVGYGNA VAIAALSSQN  360
LGAITITNAV FGSDPKISDD ILAKAFQVEK KVIDKIQSNF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01330.1	3e-35	E2F/DP family protein