PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc007442.1_g030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | bHLH | ||||||||
Protein Properties | Length: 248aa MW: 28437.5 Da PI: 8.0386 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 31.5 | 3.2e-10 | 47 | 98 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++E++RR+ +N+ + L +l+P++ + ++ + a+i+ A+ ++k+L+ Cse_sc007442.1_g030.1 47 QRMNHIAVEKNRRKMVNEHLGVLHSLMPER---YIQRFDQASIVGGAISFVKELE 98 79****************************...9******************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MGHNTIFANS CHENSQENNQ NVLLEGGRRR RRKKQKVCKS NEEEESQRMN HIAVEKNRRK 60 MVNEHLGVLH SLMPERYIQR FDQASIVGGA ISFVKELEHH LQALEAKKFT LTQQQKQDAI 120 IHDPNGDIES EMPQLPLYFR KLFSLPQYTW SQLPYENNLS KSNSTIANIQ VNLVNEHANL 180 RILMRKQLTQ LSKIVGFLET SCLTILHLNV TTLDPFVLYS ISLKVEEGCG LDSADEIANA 240 VHRILGLI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 27 | 35 | GRRRRRKKQ |
2 | 28 | 34 | RRRRRKK |
3 | 55 | 61 | EKNRRKM |
4 | 56 | 61 | KNRRKM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G22490.1 | 6e-55 | bHLH family protein |