PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc007416.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | NAC | ||||||||
Protein Properties | Length: 150aa MW: 17232.4 Da PI: 9.2944 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 119.4 | 3.5e-37 | 9 | 128 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 lppGfrF Ptdeelvv++L++k++ + + ++i+++d+y ++PwdL+ k+ e k+wy++s+r +nr+t++gyW++ g Cse_sc007416.1_g020.1 9 LPPGFRFCPTDEELVVHFLQRKASLLPYHP-DIIPDLDLYPFDPWDLDGKAMVEGKKWYYYSRRT--------QNRITTNGYWQSLGC 87 79*************************998.89**************977777899******984........589999********* PP NAM 89 dkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 d++++s+ +++ vg+kk vf+ g+ap+g+kt+W+m+e+rl Cse_sc007416.1_g020.1 88 DEQIMSSsSSKRVGVKKYYVFHIGEAPEGVKTNWIMQEFRL 128 *****9967788***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 150 aa Download sequence |
MADNNNVNLP PGFRFCPTDE ELVVHFLQRK ASLLPYHPDI IPDLDLYPFD PWDLDGKAMV 60 EGKKWYYYSR RTQNRITTNG YWQSLGCDEQ IMSSSSSKRV GVKKYYVFHI GEAPEGVKTN 120 WIMQEFRLSD GSSSSSSSGR SKRKGHSKTK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64530.1 | 4e-57 | NAC family protein |