PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc007150.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

CPP

Protein Properties

Length: 624aa MW: 70311.9 Da PI: 7.2523

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc007150.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	50.7	3.6e-16	18	56	3	41
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 +k+C+CkkskClk+YCeCf+ag +C+e+C+C+dC+N+++ Cse_sc007150.1_g030.1 18 QKHCTCKKSKCLKLYCECFSAGLYCDESCTCQDCFNRTD 56 79**********************************875 PP
2	TCR	23	1.6e-07	134	158	17	41
TCR 17 YCeCfaagkkCseeCkCedCkNkee 41 YC Cf+ag +C+e+C+C++C+N+++ Cse_sc007150.1_g030.1 134 YCVCFKAGLYCAESCTCQECFNNHD 158 **********************986 PP
3	TCR	48.9	1.3e-15	341	379	3	41
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 +k+C+C+k+kClk+YCeCf+ag +C+e+C+C++C+N++e Cse_sc007150.1_g030.1 341 QKRCRCRKTKCLKLYCECFKAGLYCGESCSCQGCFNSRE 379 799*********************************976 PP
4	TCR	48.6	1.6e-15	426	464	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 k++kgCnC+ks C+kkYCeC++a++ C+ eC+Ce+C+N Cse_sc007150.1_g030.1 426 KHRKGCNCRKSMCVKKYCECYQANVGCGTECRCEGCENV 464 589***********************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 624 aa Download sequence
MEKTAFEPST AMTTNDGQKH CTCKKSKCLK LYCECFSAGL YCDESCTCQD CFNRTDYEDT 60 VDEARQQIVS RNPHAFSPKI DSLKQSPTNH NENTKKVAIV RSQCARKGTV SAISYCACFA 120 SGLPCAESCS CGDYCVCFKA GLYCAESCTC QECFNNHDYE DSVEIAREQI QLQDPHAFSP 180 FLIMKCPTSQ NVEDENQAIP FELKNRKGCK CRSLMCMKNY CACYQFLMPI CFSANGLTLS 240 HRLKLDAVVN VDVYHVATVR NQCAAKSIVN AISYCECFKA GLFCVEFCSC RECCNSLEYK 300 DIVDEARKMI QSQDPLASSS KNRPLILMNS HSKIAGRNDG QKRCRCRKTK CLKLYCECFK 360 AGLYCGESCS CQGCFNSREY EDTVDHTREM IQLRDPLAFS PKISCLAQSA ISQNEDENQP 420 IAIMGKHRKG CNCRKSMCVK KYCECYQANV GCGTECRCEG CENVFGKKEY VYNKAHNSVK 480 KERESTESDF CVPEFCTPQN VIPRTPFQHL GYGNDVMSTG RYIPAQGSAN REMMFGTNAQ 540 NFGMVHLNQL LYPNVEYMNQ FTPVMPSLPP LMDWPNSSRD SGNYSYVSSV YWNGSTVTPV 600 NLFGGSEVMD SSEKYRDTIH YNTF

Sequence ? help Back to Top

Protein Sequence Length: 624 aa Download sequence

MEKTAFEPST AMTTNDGQKH CTCKKSKCLK LYCECFSAGL YCDESCTCQD CFNRTDYEDT  60
VDEARQQIVS RNPHAFSPKI DSLKQSPTNH NENTKKVAIV RSQCARKGTV SAISYCACFA  120
SGLPCAESCS CGDYCVCFKA GLYCAESCTC QECFNNHDYE DSVEIAREQI QLQDPHAFSP  180
FLIMKCPTSQ NVEDENQAIP FELKNRKGCK CRSLMCMKNY CACYQFLMPI CFSANGLTLS  240
HRLKLDAVVN VDVYHVATVR NQCAAKSIVN AISYCECFKA GLFCVEFCSC RECCNSLEYK  300
DIVDEARKMI QSQDPLASSS KNRPLILMNS HSKIAGRNDG QKRCRCRKTK CLKLYCECFK  360
AGLYCGESCS CQGCFNSREY EDTVDHTREM IQLRDPLAFS PKISCLAQSA ISQNEDENQP  420
IAIMGKHRKG CNCRKSMCVK KYCECYQANV GCGTECRCEG CENVFGKKEY VYNKAHNSVK  480
KERESTESDF CVPEFCTPQN VIPRTPFQHL GYGNDVMSTG RYIPAQGSAN REMMFGTNAQ  540
NFGMVHLNQL LYPNVEYMNQ FTPVMPSLPP LMDWPNSSRD SGNYSYVSSV YWNGSTVTPV  600
NLFGGSEVMD SSEKYRDTIH YNTF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22780.1	7e-29	CPP family protein