PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc007134.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 182aa MW: 21042 Da PI: 9.3993 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 76 | 2.9e-24 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krie++ r+v+fskRrng++KKA+EL vLCd++v +fs t++lyeys+ Cse_sc007134.1_g020.1 9 KRIEDNGSRHVSFSKRRNGLMKKAHELAVLCDVDVGCFVFSGTNRLYEYST 59 79***********************************************96 PP | |||||||
2 | K-box | 30.9 | 1.2e-11 | 104 | 170 | 32 | 98 |
K-box 32 qreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 + qR+l ++++ + eL qLe+q++ +l+ +R++K+el+l ++ lq+k+++l++e++ L+++l Cse_sc007134.1_g020.1 104 EMVQRQLEDHKVKQSDATELWQLEKQIQPALQLVRNRKTELMLGAVKALQEKKNQLSKEKQVLEREL 170 56678888899999999*********************************************99886 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 182 aa Download sequence |
MGRGKVELKR IEDNGSRHVS FSKRRNGLMK KAHELAVLCD VDVGCFVFSG TNRLYEYSTG 60 ESSMIKILTR YQDYKNTDEI VRRTVREKLA SEQKDVFTAD EITEMVQRQL EDHKVKQSDA 120 TELWQLEKQI QPALQLVRNR KTELMLGAVK ALQEKKNQLS KEKQVLEREL LAARLNESNV 180 DG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65050.2 | 2e-39 | MIKC_MADS family protein |