PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc006964.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | ERF | ||||||||
Protein Properties | Length: 302aa MW: 34157.6 Da PI: 4.8089 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 51.8 | 2e-16 | 194 | 244 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++GVr+++ +g++ Ae r p + +r +lg++ t+eeAa a+++a+ k +g Cse_sc006964.1_g020.1 194 KFRGVRRRP-WGKFTAEMRNPEKK--GARLWLGTYETPEEAAMAYDRAAFKHRG 244 89*******.*******9997443..4***********************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 302 aa Download sequence |
MYDQQTHFDF TQLESVRTFL LDDHSETFYN DCYPIDFLDI NTNAMNFPTL SEESSVLADN 60 SGSSSRLISS YLMEDLIEPL PNLEEFEISS LFHENSNNLL PVANYSCDNF FSVSSSSDNL 120 NDPNHTQQMF PDNTVDIPAT GSDLSVPLQW DFSTGNVVPI AEDNESQPRA KNSNKLDDVK 180 DTVAKALPSL AERKFRGVRR RPWGKFTAEM RNPEKKGARL WLGTYETPEE AAMAYDRAAF 240 KHRGSHALLN FPHLIESHNK HPEKYMTKKR AMTATTSSSS SSSSDSSKNS FEKRNKSCAY 300 ED |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44840.1 | 2e-33 | ERF family protein |