PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc006901.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Protein Properties

Length: 582aa MW: 65229.2 Da PI: 8.7864

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc006901.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	52.2	1.1e-16	122	212	1	99
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f+k ++ s+v++ ++ +p +f++++ + ++ ++ ede+g+++e+k+ ++ + l++GW+ F+ +++L egD+++F+l+ + Cse_sc006901.1_g020.1 122 FKKLMLASHVTRCFWMGIPTPFCRSFLP--QHDFLVIAEDENGKRYELKY--LAHKTG--LSAGWRTFAVSHKLHEGDVLIFQLVASC 203 8999*****************99953..36789***********..666655..9*********************9988 PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 +f +v ++r+ Cse_sc006901.1_g020.1 204 KF--KVYIVRA 212 88..8888776 PP

Sequence ? help Back to Top
Protein Sequence Length: 582 aa Download sequence
MAETAQMIEA VISDLQIDKT PKLLEAQVTI AQASPLASFA PFTPSAQIKR KRLKPARYDL 60 AFLNEKKKVS KNKAVRDPSK ASLSSGKKKT TPKDPNAPVQ ISPTMIRAGE IQSSLGNEFP 120 TFKKLMLASH VTRCFWMGIP TPFCRSFLPQ HDFLVIAEDE NGKRYELKYL AHKTGLSAGW 180 RTFAVSHKLH EGDVLIFQLV ASCKFKVYIV RASDSKEVDG TLTLFNHDVH TAVNDSKEVD 240 GTPNHLNHDA HTGASDRKEA DGTPDLSNHD GHTRASDPKE VDGTPDLSNH DAHTRASDPI 300 EVDGTPDLLN HDAHTRASDP KEVDGTPDLP NHNVHTIRIP SACWAKNSKP RGRKRLGSSL 360 LPLAKVQKKK QNMSESPTKI SNHTMDSSGV NSEVHGASPE PNVSSEKLKT FKDFRIRVNK 420 QCIDSELSEE IRKTYFKLCI RKKEILHNGV RKGLYPKLVA GMIGEMVNIA NMIKNCNFNT 480 TKEEFEVWDS SLKSFELMGM KVGFLRDRIH ELMALAFESE DAKRYMEASE EQKHNANTIQ 540 NLEEKLLELK ENDKKMDAIV SSLKEKMEKN VVEFQKHVDA PW

Sequence ? help Back to Top

Protein Sequence Length: 582 aa Download sequence

MAETAQMIEA VISDLQIDKT PKLLEAQVTI AQASPLASFA PFTPSAQIKR KRLKPARYDL  60
AFLNEKKKVS KNKAVRDPSK ASLSSGKKKT TPKDPNAPVQ ISPTMIRAGE IQSSLGNEFP  120
TFKKLMLASH VTRCFWMGIP TPFCRSFLPQ HDFLVIAEDE NGKRYELKYL AHKTGLSAGW  180
RTFAVSHKLH EGDVLIFQLV ASCKFKVYIV RASDSKEVDG TLTLFNHDVH TAVNDSKEVD  240
GTPNHLNHDA HTGASDRKEA DGTPDLSNHD GHTRASDPKE VDGTPDLSNH DAHTRASDPI  300
EVDGTPDLLN HDAHTRASDP KEVDGTPDLP NHNVHTIRIP SACWAKNSKP RGRKRLGSSL  360
LPLAKVQKKK QNMSESPTKI SNHTMDSSGV NSEVHGASPE PNVSSEKLKT FKDFRIRVNK  420
QCIDSELSEE IRKTYFKLCI RKKEILHNGV RKGLYPKLVA GMIGEMVNIA NMIKNCNFNT  480
TKEEFEVWDS SLKSFELMGM KVGFLRDRIH ELMALAFESE DAKRYMEASE EQKHNANTIQ  540
NLEEKLLELK ENDKKMDAIV SSLKEKMEKN VVEFQKHVDA PW

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	49	71	KRKRLKPARYDLAFLNEKKKVSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	3e-35	B3 family protein