PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc006893.1_g060.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 277aa    MW: 32002.1 Da    PI: 6.0042
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc006893.1_g060.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.79.9e-091663453
                           HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS
                    HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIks 53
                             +++E++RR++++s +++L +l+P++    sk  + ++ + +A+eYI++
  Cse_sc006893.1_g060.1 16 ERKIIEKNRRNQMKSLYSNLFSLIPPN--IFSKEGDVSDRVDRAIEYIQM 63
                           5689**********************7..38999**************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MEGSIKCSAS DLKKPERKII EKNRRNQMKS LYSNLFSLIP PNIFSKEGDV SDRVDRAIEY  60
IQMSKTNLEL LKNRKEKLSS RKRSHEHTKM INNVCKPVDI QIHEISHDID AVLVTGLDNH  120
SSFCDVVWLL SRYSAEVTLA NFSSNGHSTF HIRQKKIEGQ DIRKRLKSLL EGSLNVKELE  180
HNHALFSLPV TLPQPRLDTG IESGSQRIEE SQINLQKELD SLSCNELEYD SNLSIWDLDF  240
QSNVWITCNE LDYEPNLSIW DFDFHPSVWG SELEVFQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.14e-11bHLH family protein