PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Cse_sc005953.1_g040.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
|
||||||||
Family | Nin-like | ||||||||
Protein Properties | Length: 209aa MW: 24094.2 Da PI: 9.8729 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 51.3 | 2.3e-16 | 55 | 101 | 6 | 52 |
RWP-RK 6 sledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 + e +++y+++pi++AAk+ ++++T+ K++ R++GI+R P+Rk++s+ Cse_sc005953.1_g040.1 55 RREIIAQYYYMPIAKAAKKFNIGTTIFKKRYRELGIQRLPYRKLTSI 101 67889***************************************996 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 209 aa Download sequence |
MIPDDDVNPK DDKKKKRLDI EDSDAEIDMT PADDDQGEAS VPIVKKKATF RKKTRREIIA 60 QYYYMPIAKA AKKFNIGTTI FKKRYRELGI QRLPYRKLTS IQLFINTIQA ENGGANVDGN 120 TQEIITRPQE EKKCVEENPN LEFRKSTKRL RQFYFKSKYK RRKSMSLILS LTNQPTTSAA 180 TQLHYSSKAS SAEHTNSKDG YDSDCSEHD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G66990.1 | 2e-29 | Nin-like family protein |