PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc005510.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | ERF | ||||||||
Protein Properties | Length: 242aa MW: 27181.7 Da PI: 8.0695 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.6 | 3.5e-19 | 163 | 213 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkklege 56 +y+GVr++ +g W+AeIrd + r r++lg+fgtae+Aa+a+++a+ ++ge Cse_sc005510.1_g010.1 163 QYRGVRQRQ-WGTWAAEIRDpW-----RkVRVWLGTFGTAEQAARAYDRAAIHFRGE 213 69****999.**********88.....45**********************999986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
MVVVLFTSVL GIVIRSSYHI APDMTLDNFS ILNAYSRCYQ AFPKNHEQSH VLRIDFECLE 60 NTNHHCSLTA DEEHSIIVST LKNVISGHTD TPITSSLLLP STSGTHTTNN KILLLSEHPV 120 EVCQVCGIIG CLGCNFFWQN APTYDGGAQQ KGGGCCGRKR KRQYRGVRQR QWGTWAAEIR 180 DPWRKVRVWL GTFGTAEQAA RAYDRAAIHF RGEKAKTNFP ECDYREQEAP PVKSKGAHEE 240 CN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34410.1 | 2e-20 | ERF family protein |