PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc005353.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | WRKY | ||||||||
Protein Properties | Length: 178aa MW: 20408.4 Da PI: 5.6461 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 72.9 | 4.3e-23 | 128 | 176 | 1 | 49 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEE CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvve 49 ldDgy+WrKYG+K +k +++pr+Y+rCt+ gC+vkk+ver+++d ++++ Cse_sc005353.1_g010.1 128 LDDGYRWRKYGKKAIKCTPNPRNYFRCTTIGCKVKKRVERDRDDSSYII 176 59****************************************9998876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 178 aa Download sequence |
METCLNLSKL AQKSTMDAFL PISDRQDQTG NPNFSSSSFN CPSITNDDRV YDHTNVDNTL 60 YYNHNLTDDN SNPNTLSLID HQDSSSSNSL SYFNTNEQTP DHLLEITTDR LNDDTKIGFR 120 IQTALEVLDD GYRWRKYGKK AIKCTPNPRN YFRCTTIGCK VKKRVERDRD DSSYIIAT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G26170.1 | 3e-27 | WRKY family protein |