PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc005198.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 380aa MW: 43676.5 Da PI: 6.509

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc005198.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	166.5	9.2e-52	18	146	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWka 85 +ppGfrFhPt+eel+++yL+kkv+ +k++l +vi+++d++k+ePwd+++k++ +++wyfFs++dkky+tg+r+nrat++g+Wka Cse_sc005198.1_g040.1 18 VPPGFRFHPTEEELLHYYLRKKVAYEKIDL-DVIRDIDLNKLEPWDIQEKCRIgstPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKA 104 69**************************.9***********964443122456************************* PP NAM 86 tgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 tg+dk ++s +++ +g++ktLvfykgrap+g+k+dW+mheyrl Cse_sc005198.1_g040.1 105 TGRDKVIHS-SHRRIGMRKTLVFYKGRAPHGQKSDWIMHEYRL 146 ***99.8889*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
MSKEEVSLSM NVNGHSKVPP GFRFHPTEEE LLHYYLRKKV AYEKIDLDVI RDIDLNKLEP 60 WDIQEKCRIG STPQNDWYFF SHKDKKYPTG TRTNRATAAG FWKATGRDKV IHSSHRRIGM 120 RKTLVFYKGR APHGQKSDWI MHEYRLDDNT IITQDYGHGS NLCDSTQEEG WVVCRVFKKK 180 NYHKAVESPQ RSSTAPSIDL NAQMRSLNKN GSVHDQFLEY INTCKQETDS LANITTMKDY 240 NQMQQLMNPI NNRFLHLPRL DNTPNMTTSG HYDASTINQD PNFVHNSMTQ LLTTEAEHLD 300 NWADVDRLVA SQLNGEPQSD EPNKDMCFGL DHDHEDLEPP QLHGSSSLAK TAYTSEIDLW 360 SFAQSSSQSS SPDPFYNLSV

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

MSKEEVSLSM NVNGHSKVPP GFRFHPTEEE LLHYYLRKKV AYEKIDLDVI RDIDLNKLEP  60
WDIQEKCRIG STPQNDWYFF SHKDKKYPTG TRTNRATAAG FWKATGRDKV IHSSHRRIGM  120
RKTLVFYKGR APHGQKSDWI MHEYRLDDNT IITQDYGHGS NLCDSTQEEG WVVCRVFKKK  180
NYHKAVESPQ RSSTAPSIDL NAQMRSLNKN GSVHDQFLEY INTCKQETDS LANITTMKDY  240
NQMQQLMNPI NNRFLHLPRL DNTPNMTTSG HYDASTINQD PNFVHNSMTQ LLTTEAEHLD  300
NWADVDRLVA SQLNGEPQSD EPNKDMCFGL DHDHEDLEPP QLHGSSSLAK TAYTSEIDLW  360
SFAQSSSQSS SPDPFYNLSV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46770.1	1e-106	NAC family protein