PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc005071.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 248aa MW: 27814.1 Da PI: 8.4021 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 56.9 | 3.5e-18 | 105 | 159 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tk q Lee+F+ +++++ ++++ LA+ l+L rqV vWFqNrRa+ k Cse_sc005071.1_g020.1 105 RKKLRLTKAQSGLLEEAFKLQPTLNPKQKQNLARDLNLRPRQVEVWFQNRRARTK 159 78889************************************************98 PP | |||||||
2 | HD-ZIP_I/II | 117.5 | 7.7e-38 | 105 | 194 | 1 | 90 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLr 88 +kk+rl+k q+ lLEe F+ + +L+p++K++lar+L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l++en+rL++ev++Lr Cse_sc005071.1_g020.1 105 RKKLRLTKAQSGLLEEAFKLQPTLNPKQKQNLARDLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCKTLTDENQRLRQEVQQLR 192 69*************************************************************************************9 PP HD-ZIP_I/II 89 ee 90 ++ Cse_sc005071.1_g020.1 193 AQ 194 76 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MGLHGFANTE IALELCLNSI SSMAKNTTTK EPNPSTNDHH LRPSLTLASS SDSCRRGSGS 60 FFSNASTVKR ERDVASEESE RIMENNTSGH EDGDHDEGDG GANNRKKLRL TKAQSGLLEE 120 AFKLQPTLNP KQKQNLARDL NLRPRQVEVW FQNRRARTKL KQTEVDCEYL KRCCKTLTDE 180 NQRLRQEVQQ LRAQKMSQPL YMQLPAAALT MCPSCEQIGD IDTNSATTKT SFTKPYFFNT 240 FTSSSAAC |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 154 | 162 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37790.1 | 4e-69 | HD-ZIP family protein |