PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc004706.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

WRKY

Protein Properties

Length: 321aa MW: 36615.9 Da PI: 5.9965

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc004706.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	72.3	6.7e-23	131	191	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 dDgy+WrKYGqK++ ++++ r+Y+rCt++ gC+++k+v++ +++p ++tY+g+H+++ Cse_sc004706.1_g020.1 131 DDGYAWRKYGQKPILNAKYQRNYFRCTHKgdqGCQATKQVQKIDDEPPKYVTTYNGHHTCK 191 8*************************99999************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 321 aa Download sequence
MESSSWPGSL PCNHIKAIQE LTRGQQLTNK LREMLGQQEK IESDFKLVDG VVDEIKGMFD 60 NTLSILNSYT FNEKPHIQTH DMRCQSSVDD QQSHDSGESE KSVRSVKNRR GCYKRGRTSS 120 TSTKVTSTLI DDGYAWRKYG QKPILNAKYQ RNYFRCTHKG DQGCQATKQV QKIDDEPPKY 180 VTTYNGHHTC KNLQTAFHII LDTPNLRDNL FLLNFETSTP TENKQASPCL ISMKQTPKED 240 LPSLCMENEQ ASSCNNYTPW DPITELSQVS FEPVSMIPSG FDHVDMISSE TFSYTCSTDC 300 YKIDHMIGSN DFGELLYEFC Q

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56400.1	3e-33	WRKY family protein