PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc004666.1_g070.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family B3
Protein Properties Length: 844aa    MW: 96261.9 Da    PI: 4.1692
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc004666.1_g070.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B346.18.7e-15238324692
                            ..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
                     B3   6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrsefe 91 
                            ++s+ ++++ l++p kf++   ++++e  t+tle+ +g + e+ ++ +kks++  y+ ++GWkeF ++n++ egD +vFk++ ++++ 
  Cse_sc004666.1_g070.1 238 LTSSKSNKNKLRFPPKFVALARIDTRE--TITLENYDGSEKEISVQSEKKSKStsYYVAAGWKEFQRSNDISEGDKCVFKFITSEDKI 323
                            3567777777********777777666..78888888855555555555554445*************************99766664 PP

                            . CS
                     B3  92 l 92 
                            +
  Cse_sc004666.1_g070.1 324 C 324
                            4 PP
2B3314.6e-103914651183
                            HHTT-EE--HHH.HTT---..--SEEEEEETTS......-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE CS
                     B3  11 lksgrlvlpkkfaeehggkkeesktltledesg......rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk 83 
                            + ++ l++p +f+++ g++  ++ktl+l++++g       +++ ++    + +ry+l kGWk+F +  ++ egD + F+
  Cse_sc004666.1_g070.1 391 THNHVLRMPTDFVRSAGID--TKKTLMLRSLDGyemampVQFDTQY--GYHAKRYFLLKGWKDFMQGTNISEGDKCRFS 465
                            4567899*******99999..4569********7777555555555..888999***********************98 PP
3B345.11.8e-145866741298
                            HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE.......EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
                     B3  12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy.....rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                            ++++l+lp +f++  g++++e   +++ +++g++ e+++ +     rk s +y+l+kGW  F ++n++ +gD +vFk++ ++++ ++ 
  Cse_sc004666.1_g070.1 586 NKRNLYLPIDFVRLAGIDTKE--NIIMISLDGNECEMTV-WkdtrtRKLSTQYYLSKGWHAFMRSNNISQGDKCVFKYITSEDKVCLA 670
                            4567********888888655..7***************.435555555556***************************888887777 PP

                            EEE- CS
                     B3  95 kvfr 98 
                            k+++
  Cse_sc004666.1_g070.1 671 KIIK 674
                            7765 PP
4B338.61.9e-12696781893
                            -HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
                     B3   8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                              ++ +++l++  +f++  g++  ++kt+++++++g + e+ ++ +k+ ++  y+ ++GWkeF ++ ++ egD++vFk+++++++ ++
  Cse_sc004666.1_g070.1 696 ITTMHNSMLRFLSDFVTLAGID--KKKTIIFKNLNGFEKEMAVQRDKQFRSttYFVASGWKEFLRDTDISEGDICVFKFIRSEDKICL 781
                            5566677788888888666777..4569********77777775555554466**************************997776555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 844 aa     Download sequence    
MADQRPPSFF HILMNPSSPH LPFPPKFVTK HLGDKILKDP LIKSANGGYL WKLTMKKIDD  60
HSYCLVDGWC NVVKDVGLLF GEFLLFRYVG SSVFLMHVYS VNGCEKFLVP KIKVPSFKVV  120
DYGCIDDVDD EVEEVDDVVY DVDDDDDDHH HHRHHHVEDE DDVEFVDDGD EDDDMEEVED  180
EDDVEFVNDG DKDDGMEEDD DDDNDDAGDE DDIECVYDGD EDDDVDVDGD DGDPFFILTS  240
SKSNKNKLRF PPKFVALARI DTRETITLEN YDGSEKEISV QSEKKSKSTS YYVAAGWKEF  300
QRSNDISEGD KCVFKFITSE DKICLAKITK KKSPARPLPP AAEAPVTEVD TDDVGDDDDM  360
DVEDDNDKDE DEDFELVDED DPFFVVTITP THNHVLRMPT DFVRSAGIDT KKTLMLRSLD  420
GYEMAMPVQF DTQYGYHAKR YFLLKGWKDF MQGTNISEGD KCRFSPDFVA LARIDTRETI  480
TLKNDDGCEK EMPVHSDKRR KSTSYYVATG WKEFQQNKIC LAKITERKSP ARSLPPAAEA  540
PVMEVDAVED DDIMDDKDTE DGNDEDDDED VELVDEDDPF FVTTINKRNL YLPIDFVRLA  600
GIDTKENIIM ISLDGNECEM TVWKDTRTRK LSTQYYLSKG WHAFMRSNNI SQGDKCVFKY  660
ITSEDKVCLA KIIKAQPAQA KKVDVYDEDP SFVVTITTMH NSMLRFLSDF VTLAGIDKKK  720
TIIFKNLNGF EKEMAVQRDK QFRSTTYFVA SGWKEFLRDT DISEGDICVF KFIRSEDKIC  780
LAKITKKKTP AGPPPRAIKS PVTEVDDDAA AADDDDDENE DVECVDDGDP FFVVTISYTY  840
KYML
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26680.14e-11B3 family protein