PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc004397.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 374aa MW: 42220.8 Da PI: 6.8328

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc004397.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	170.5	5.2e-53	30	159	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87 lppGfrFhPtdeel+++yL+ kv ++++ + v i+evd++++ePw+Lp+ +k +e+ewyf+s rd+ky+tg r+nrat +gyWkatg Cse_sc004397.1_g030.1 30 LPPGFRFHPTDEELITFYLASKVFSSTTFC-GVdIAEVDLNRCEPWELPEVAKMGEREWYFYSLRDRKYPTGLRTNRATGAGYWKATG 116 79*********************99777.555***********8888999**************************** PP NAM 88 kdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 kd+ev+++ +++l g+kktLvfykgrap+gekt+Wvmheyrl Cse_sc004397.1_g030.1 117 KDREVYTSgsGRTLLGMKKTLVFYKGRAPHGEKTKWVMHEYRL 159 ***9767778*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 374 aa Download sequence
MMLGIEDILC ELGGTDGGGC GRESENNGGL PPGFRFHPTD EELITFYLAS KVFSSTTFCG 60 VDIAEVDLNR CEPWELPEVA KMGEREWYFY SLRDRKYPTG LRTNRATGAG YWKATGKDRE 120 VYTSGSGRTL LGMKKTLVFY KGRAPHGEKT KWVMHEYRLD GDFSYRHTCK DEWVICRIFH 180 KLGEKKSSGG QNYSHFKHHQ STLEPSPSTP THNEISKKPF NTTPLMHHPN NPPPLQNPFL 240 FGDKYQEIND QDLKSLLNLP TFPNIPTTPN STLVKTLLLP IQPTTPTPIT KQCKIEEHFS 300 IPQISDANLL HRWGTEYVPP TPLFTFEQQD LGGLECFLNT SGGARLVAEG TSDRSNEMVS 360 FDRVAFNNLL LPTI

Sequence ? help Back to Top

Protein Sequence Length: 374 aa Download sequence

MMLGIEDILC ELGGTDGGGC GRESENNGGL PPGFRFHPTD EELITFYLAS KVFSSTTFCG  60
VDIAEVDLNR CEPWELPEVA KMGEREWYFY SLRDRKYPTG LRTNRATGAG YWKATGKDRE  120
VYTSGSGRTL LGMKKTLVFY KGRAPHGEKT KWVMHEYRLD GDFSYRHTCK DEWVICRIFH  180
KLGEKKSSGG QNYSHFKHHQ STLEPSPSTP THNEISKKPF NTTPLMHHPN NPPPLQNPFL  240
FGDKYQEIND QDLKSLLNLP TFPNIPTTPN STLVKTLLLP IQPTTPTPIT KQCKIEEHFS  300
IPQISDANLL HRWGTEYVPP TPLFTFEQQD LGGLECFLNT SGGARLVAEG TSDRSNEMVS  360
FDRVAFNNLL LPTI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76420.1	1e-96	NAC family protein