PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc004326.1_g030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | ERF | ||||||||
Protein Properties | Length: 203aa MW: 22744.6 Da PI: 5.9497 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 44.3 | 4.4e-14 | 57 | 107 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr + +g+Wv+e+r+p + r++lg++ ae+A +a++ a ++++ Cse_sc004326.1_g030.1 57 PVYRGVRSRG-KGKWVCEVRHPI----TqSRVWLGTHPNAEMASRAHDVAVLAMRE 107 68*****888.7*********72....46**********************99986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 203 aa Download sequence |
MNEYYNSFPS SSSSTETPLT STDGSGSFSS ELEVLMLATE NPKKRAGRKK FKETRHPVYR 60 GVRSRGKGKW VCEVRHPITQ SRVWLGTHPN AEMASRAHDV AVLAMREPKY ACLNFADSVW 120 RLPVPESNHV ADIQKAAAEA AEAFRHTKPE VAMDYYMNED ELPGFLDSMA EALMLPPPQS 180 FVGYGSNIFD DVESCADMSL WNF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51990.1 | 5e-55 | ERF family protein |