PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc004158.1_g060.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

HRT-like

Protein Properties

Length: 409aa MW: 46137.8 Da PI: 9.8332

Description

HRT-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc004158.1_g060.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HRT-like	52.1	1.1e-16	262	292	1	31
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 +CGv+l++GsvC ++Pv+gRKRC HKGm++ Cse_sc004158.1_g060.1 262 VCGVALGHGSVCIKPPVEGRKRCVDHKGMKV 292 7****************************97 PP
2	HRT-like	45.6	1.2e-14	311	341	1	31
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 +C v+l+dGs+C+r v g+KRCe HKG Ri Cse_sc004158.1_g060.1 311 TCAVTLDDGSICTRVSVVGKKRCEHHKGLRI 341 7*****************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 409 aa Download sequence
MTKTPELKRE NCKRTKHDSL FSNWKILIGA CDWEDYLLNK EGAERYRTQN IPNCASCPGI 60 YELGIVVSLS RTNEKTSSKL TSKNIITVYL GQADNVRTRL QQYGRDGAHL ENGLSNGEQL 120 DRKVLGLFSD IFSYGFAIAF RWAPMESKKD AEKTETQLLK TFDYAWNREM NGERRPGDIH 180 RKLDAASSPK RVPLVFKKIH VFRPKKVGLT IKRCDSPVSE NGSSFYMKQK DTNILFRIFK 240 FGRSRPTLVS KEFDINNTDA TVCGVALGHG SVCIKPPVEG RKRCVDHKGM KVNAVVKPTL 300 HTNIEDTTHL TCAVTLDDGS ICTRVSVVGK KRCEHHKGLR IGRRVQSGLD TQIETFCNRQ 360 KSCEEHEMIE VDGKGSLSCA AITRNGTSCK RKPGKDSKFC WQHEASKTL

Sequence ? help Back to Top

Protein Sequence Length: 409 aa Download sequence

MTKTPELKRE NCKRTKHDSL FSNWKILIGA CDWEDYLLNK EGAERYRTQN IPNCASCPGI  60
YELGIVVSLS RTNEKTSSKL TSKNIITVYL GQADNVRTRL QQYGRDGAHL ENGLSNGEQL  120
DRKVLGLFSD IFSYGFAIAF RWAPMESKKD AEKTETQLLK TFDYAWNREM NGERRPGDIH  180
RKLDAASSPK RVPLVFKKIH VFRPKKVGLT IKRCDSPVSE NGSSFYMKQK DTNILFRIFK  240
FGRSRPTLVS KEFDINNTDA TVCGVALGHG SVCIKPPVEG RKRCVDHKGM KVNAVVKPTL  300
HTNIEDTTHL TCAVTLDDGS ICTRVSVVGK KRCEHHKGLR IGRRVQSGLD TQIETFCNRQ  360
KSCEEHEMIE VDGKGSLSCA AITRNGTSCK RKPGKDSKFC WQHEASKTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56780.1	1e-92	HRT-like family protein