PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc004015.1_g080.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 554aa MW: 61959.1 Da PI: 5.2029

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc004015.1_g080.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	161.7	2.9e-50	14	143	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkat 86 lp+G+rF+Ptdeelv++yL+ k++g++ e+ ++i+evd++k ePwdLp + +++ ++ew+fF+++d+ky++g+r+nrat sgyWkat Cse_sc004015.1_g080.1 14 LPVGYRFRPTDEELVNHYLRLKINGHDKEV-SCIREVDVCKKEPWDLPdlSVIESIDNEWFFFCPKDRKYQNGQRSNRATVSGYWKAT 100 799**********************999.89**********96447788899************************** PP NAM 87 gkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 gkd++++++ +++++g kktLvfy+grapkge+t+Wv+hey + Cse_sc004015.1_g080.1 101 GKDRTIKTSrGSNVIGKKKTLVFYTGRAPKGERTHWVIHEYCA 143 **99867788*************************75 PP

Sequence ? help Back to Top
Protein Sequence Length: 554 aa Download sequence
MEVAPIQALP VQKLPVGYRF RPTDEELVNH YLRLKINGHD KEVSCIREVD VCKKEPWDLP 60 DLSVIESIDN EWFFFCPKDR KYQNGQRSNR ATVSGYWKAT GKDRTIKTSR GSNVIGKKKT 120 LVFYTGRAPK GERTHWVIHE YCATEKELNG THPGQSPYVL CRLFKKHDVK EDNGESFDGV 180 DADQSYASPP SVVKSSPEDV ASEPVTPVVT GQLTIHPSNN GSLKIENTEG KNDPMHYLDC 240 PTEFDIDQLN YEMVRATDSD YMDLEKALEG FWDASPEQHF DSKIFSPLHS QMHSELGSTY 300 MNNYGMVNSG NEHNGMQNQY GTNGMDFLET FMVESDQFSY DDSGYKEGSV AQISIPEVHV 360 KDQEYSSESD GEVIQVQPAS RDFAFDQSYI LQSAKPEENP VFHIRPKEDS PSSSSSNIAF 420 ASNDDNNKFD TGIIIRPRQT QRAGPTFNNQ GTAPRRIRLQ KKLQMGPVST QVRPTMPMVA 480 EEKEAKLSPT ASDAASTTGS DAISTNGGGY DQELNSKVKP KADSLISFRV HMPKVLLVLG 540 LCLGAATLWS CLVY

Sequence ? help Back to Top

Protein Sequence Length: 554 aa Download sequence

MEVAPIQALP VQKLPVGYRF RPTDEELVNH YLRLKINGHD KEVSCIREVD VCKKEPWDLP  60
DLSVIESIDN EWFFFCPKDR KYQNGQRSNR ATVSGYWKAT GKDRTIKTSR GSNVIGKKKT  120
LVFYTGRAPK GERTHWVIHE YCATEKELNG THPGQSPYVL CRLFKKHDVK EDNGESFDGV  180
DADQSYASPP SVVKSSPEDV ASEPVTPVVT GQLTIHPSNN GSLKIENTEG KNDPMHYLDC  240
PTEFDIDQLN YEMVRATDSD YMDLEKALEG FWDASPEQHF DSKIFSPLHS QMHSELGSTY  300
MNNYGMVNSG NEHNGMQNQY GTNGMDFLET FMVESDQFSY DDSGYKEGSV AQISIPEVHV  360
KDQEYSSESD GEVIQVQPAS RDFAFDQSYI LQSAKPEENP VFHIRPKEDS PSSSSSNIAF  420
ASNDDNNKFD TGIIIRPRQT QRAGPTFNNQ GTAPRRIRLQ KKLQMGPVST QVRPTMPMVA  480
EEKEAKLSPT ASDAASTTGS DAISTNGGGY DQELNSKVKP KADSLISFRV HMPKVLLVLG  540
LCLGAATLWS CLVY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G24590.2	7e-89	NAC family protein