PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc003552.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

G2-like

Protein Properties

Length: 402aa MW: 44582.5 Da PI: 7.3113

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc003552.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	85.5	5.5e-27	136	190	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k +++Wtp+LH+rFv+aveqL G +kA+P++ile+m++ +Lt+++++SHLQkYR++ Cse_sc003552.1_g030.1 136 KVKVDWTPDLHRRFVQAVEQL-GVDKAVPSRILEIMGIGCLTRHNIASHLQKYRSH 190 5689***************.******************************86 PP
2	Myb_DNA-binding	36.5	1.2e-11	139	188	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT++++ ++v+av+qlG + +++I + mg +t+ ++ s++qky+ Cse_sc003552.1_g030.1 139 VDWTPDLHRRFVQAVEQLGVDkaVPSRILEIMGiGCLTRHNIASHLQKYR 188 57******************************889**********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 402 aa Download sequence
MLAVVSPLEN NTGRDGRDNH QGGDMVGFDD FPDFSDDNLL ESIDFDDLFV GMDDDDDRDM 60 LPPLEMDPEL FSFSGGREED SSDNNNINNS INNNNNCVTS LSRVEDDFKS SKEDVSKSPN 120 RPKKSSSKNS SQGKRKVKVD WTPDLHRRFV QAVEQLGVDK AVPSRILEIM GIGCLTRHNI 180 ASHLQKYRSH RKHLLAREAE AASWSQRRQI YGRSASSPGG NVGGCKRDMR PWVAPPTMGF 240 PPVTPVPHYR PLHVWGHPSM DRPLMSVWPK HVVHSPPPTH AWPPSPSPPP TWLPHHQRAP 300 CFPQMLPQAK YPAPHGQVPG IPPPHAMYKI DPVIGVTTHI GQSCPQPPLD LHPSKESIDA 360 AIGDILSKPW QPLPLGLKPP ALDSVMVQLK RQGIPKIPPA CV

Sequence ? help Back to Top

Protein Sequence Length: 402 aa Download sequence

MLAVVSPLEN NTGRDGRDNH QGGDMVGFDD FPDFSDDNLL ESIDFDDLFV GMDDDDDRDM  60
LPPLEMDPEL FSFSGGREED SSDNNNINNS INNNNNCVTS LSRVEDDFKS SKEDVSKSPN  120
RPKKSSSKNS SQGKRKVKVD WTPDLHRRFV QAVEQLGVDK AVPSRILEIM GIGCLTRHNI  180
ASHLQKYRSH RKHLLAREAE AASWSQRRQI YGRSASSPGG NVGGCKRDMR PWVAPPTMGF  240
PPVTPVPHYR PLHVWGHPSM DRPLMSVWPK HVVHSPPPTH AWPPSPSPPP TWLPHHQRAP  300
CFPQMLPQAK YPAPHGQVPG IPPPHAMYKI DPVIGVTTHI GQSCPQPPLD LHPSKESIDA  360
AIGDILSKPW QPLPLGLKPP ALDSVMVQLK RQGIPKIPPA CV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20570.1	1e-70	G2-like family protein