PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc002969.1_g110.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

WRKY

Protein Properties

Length: 456aa MW: 50917 Da PI: 7.5379

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc002969.1_g110.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	71.1	1.5e-22	267	327	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 dDgy+WrKYGqK + ++++ r+Y+rCt++ gC+++k+v++++++p ++tY+g+H+++ Cse_sc002969.1_g110.1 267 DDGYAWRKYGQKAILDAKHQRNYFRCTHRfdqGCQATKQVQKTNDEPPKYKTTYNGHHTCK 327 8*************************9999*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 456 aa Download sequence
STGFKPKSTF VYCIVSITSV YGTSKMQGRM QNNGFSTSLT IGASTSSNKG PENSDDINLV 60 FIRNSYVVLN KHEKVFENVD ISKAGNEGKT GKDATMAVDE SDSDVEGKTG KDTMRLLISW 120 HPHQRKHVEV QMMYGYLRLK IMTYNLPSNR IKAIQELTQG KHLTIKLREL LEQPEKLESD 180 RKSVDGVVAQ ILGMFENTLS ALNSSSIETS GIPTTGDTGS PRSWDDQKSE DSSESVKTLT 240 PRKTKRGCYK RRNTSSACIK VTSTLIDDGY AWRKYGQKAI LDAKHQRNYF RCTHRFDQGC 300 QATKQVQKTN DEPPKYKTTY NGHHTCKNIQ KVPQIILDSP NPRDNSILIN FGTNTSTENT 360 RAGPCFDSIN QKPKDGLPSI VLKHEQDSSC NHYTPWDPIM GLSQVPSDPM SMLSSELDHE 420 DMISSGVFSS TSSTNGYEMD DMLGSNEFGD FPFELC

Sequence ? help Back to Top

Protein Sequence Length: 456 aa Download sequence

STGFKPKSTF VYCIVSITSV YGTSKMQGRM QNNGFSTSLT IGASTSSNKG PENSDDINLV  60
FIRNSYVVLN KHEKVFENVD ISKAGNEGKT GKDATMAVDE SDSDVEGKTG KDTMRLLISW  120
HPHQRKHVEV QMMYGYLRLK IMTYNLPSNR IKAIQELTQG KHLTIKLREL LEQPEKLESD  180
RKSVDGVVAQ ILGMFENTLS ALNSSSIETS GIPTTGDTGS PRSWDDQKSE DSSESVKTLT  240
PRKTKRGCYK RRNTSSACIK VTSTLIDDGY AWRKYGQKAI LDAKHQRNYF RCTHRFDQGC  300
QATKQVQKTN DEPPKYKTTY NGHHTCKNIQ KVPQIILDSP NPRDNSILIN FGTNTSTENT  360
RAGPCFDSIN QKPKDGLPSI VLKHEQDSSC NHYTPWDPIM GLSQVPSDPM SMLSSELDHE  420
DMISSGVFSS TSSTNGYEMD DMLGSNEFGD FPFELC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56400.1	5e-45	WRKY family protein