PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc002668.1_g050.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 697aa MW: 82002.7 Da PI: 8.7173

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc002668.1_g050.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	74.4	2.5e-23	42	135	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.....dgkwevtklele 84 fY++YAk GFsvr + ++k++ge ++r+f C +eg++e + + +k++r+r ++r+gCka++++k+++ ++w+vt++++e Cse_sc002668.1_g050.1 42 FYQKYAKINGFSVRYGRFVNNKKTGEKKRRDFFCHREGTQEAKVVDYTKKQRNRGSSRCGCKAHMRIKLKRindifPEEWQVTQFVTE 129 9*******************************************9*****************99886555689***** PP FAR1 85 HnHela 90 HnH l Cse_sc002668.1_g050.1 130 HNHVLL 135 *986 PP

Sequence ? help Back to Top
Protein Sequence Length: 697 aa Download sequence
MMKELAFDLN EIPNEEDVES HKEICTPFIG QCFLSEEEAF LFYQKYAKIN GFSVRYGRFV 60 NNKKTGEKKR RDFFCHREGT QEAKVVDYTK KQRNRGSSRC GCKAHMRIKL KRINDIFPEE 120 WQVTQFVTEH NHVLLSTQEV RFLPSYRCIT IEDENRILML KEGGLSIRQI MRVMELERNV 180 RHGELSFLVK DVHNFLNKFQ RMHSKNDARD LLEYCKQTKI ENHNFQYTYT IDGESRLEHI 240 YWSHAHSFDW YQKYGDVVVF DTTYKVNSYD MPFGIFVGID NHGRTILLGC ALLRNETTKA 300 FRWLFKNFSL LMGKPPQTIL TAQDPWMSKA IAQEMSTTKH AFCIWHITTK FSGWFTSILR 360 SEYSSWCSEF YNLYKLDTIE EFEQQWPLVI AKYNLNENKH VDGLYEIKEF WVPAYLRGFF 420 FGGMTTTGRS ESINAFIKRF ISSRTCLNQF VRQVDLAIED VEQKQVHDTM LEKYRGSFLR 480 SLSPLEEQGH HYLTPYAFKK FQDEFGKAFQ YSIQEENCTT FIVNHHKVTR HHTVFWDGNV 540 ASCSCKYFEF IGILCRHILS VFVHKDCFEI PSTYWLSRWR RQEVQLQDIS PSHEEATLMD 600 STPSNNSELG PISIDLVQRP PMSTPKGRPK KICPKGGNEF AKQVRRCSLC KGTGHYISGC 660 PNNKNIIGRG IAQRRAKKKK KIAEENENLN PIFCLKY

Sequence ? help Back to Top

Protein Sequence Length: 697 aa Download sequence

MMKELAFDLN EIPNEEDVES HKEICTPFIG QCFLSEEEAF LFYQKYAKIN GFSVRYGRFV  60
NNKKTGEKKR RDFFCHREGT QEAKVVDYTK KQRNRGSSRC GCKAHMRIKL KRINDIFPEE  120
WQVTQFVTEH NHVLLSTQEV RFLPSYRCIT IEDENRILML KEGGLSIRQI MRVMELERNV  180
RHGELSFLVK DVHNFLNKFQ RMHSKNDARD LLEYCKQTKI ENHNFQYTYT IDGESRLEHI  240
YWSHAHSFDW YQKYGDVVVF DTTYKVNSYD MPFGIFVGID NHGRTILLGC ALLRNETTKA  300
FRWLFKNFSL LMGKPPQTIL TAQDPWMSKA IAQEMSTTKH AFCIWHITTK FSGWFTSILR  360
SEYSSWCSEF YNLYKLDTIE EFEQQWPLVI AKYNLNENKH VDGLYEIKEF WVPAYLRGFF  420
FGGMTTTGRS ESINAFIKRF ISSRTCLNQF VRQVDLAIED VEQKQVHDTM LEKYRGSFLR  480
SLSPLEEQGH HYLTPYAFKK FQDEFGKAFQ YSIQEENCTT FIVNHHKVTR HHTVFWDGNV  540
ASCSCKYFEF IGILCRHILS VFVHKDCFEI PSTYWLSRWR RQEVQLQDIS PSHEEATLMD  600
STPSNNSELG PISIDLVQRP PMSTPKGRPK KICPKGGNEF AKQVRRCSLC KGTGHYISGC  660
PNNKNIIGRG IAQRRAKKKK KIAEENENLN PIFCLKY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	673	680	QRRAKKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	1e-154	FAR1 family protein