PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc002551.1_g040.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | E2F/DP | ||||||||
Protein Properties | Length: 213aa MW: 24385.3 Da PI: 10.0194 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 36.5 | 8.2e-12 | 12 | 49 | 39 | 71 |
E2F_TDP 39 vknkrRRiYDilNVLealnliek.....kekneirwkg 71 k+k+RR+YDi+NV+++++l+ek + k+++rw g Cse_sc002551.1_g040.1 12 RKTKVRRLYDIANVFQSMDLLEKirhpeNGKPAFRWLG 49 589************************999******87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence |
MRNNFLSYCP SRKTKVRRLY DIANVFQSMD LLEKIRHPEN GKPAFRWLGV KGHPNTKSLA 60 LDTSNSKKRA FGTDITNHTD SKRYRMDSSS DWSSKGVTVA MHRNSDCMKF EYDENNTMLQ 120 QPQRNSKEFV FGPFTPATAH RAGASGNKRL TQTQDWENLA DTYRPQYRNK GTFVNLSGGK 180 SGGLALNDVF GHYVEAWKSW YVEADEKEVQ LVS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01330.1 | 2e-32 | E2F/DP family protein |