PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc002504.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 296aa    MW: 34321.4 Da    PI: 6.9283
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc002504.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.44e-11164211455
                            HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                    HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                            +h+ +Er RR++i++++ +L+ ++P +    +k   Ka +L ++++Y++sLq
  Cse_sc002504.1_g020.1 164 SHSLAERVRREKIREKMKTLQAIIPGC----DKITGKAHMLDEVINYVQSLQ 211
                            8*************************9....899*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MEASPTHHQH HLLLADQCLS SRNIATANTT SDNNEFIPHS SIEVSAHGIL ASSENNLQSS  60
NSLMSIHDDK LGRKMPTTIS TSFNHVQTKD MTKETCKRWR KQKKSNDVQQ DKKKVRDSKE  120
EEEQRGYIHV RARRDKKKVR DSKEEEEQRG YIHVRARRGE ATDSHSLAER VRREKIREKM  180
KTLQAIIPGC DKITGKAHML DEVINYVQSL QNEIQILSLK LASVNPINDY EADLEAFTVK  240
PHQNMTTNQQ EQLSFHEYQM PCMLSQNHEE ALWELEEQRQ GLDDDLFAII NYNSLY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.23e-40bHLH family protein