PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc002370.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

ERF

Protein Properties

Length: 340aa MW: 38402.7 Da PI: 4.7282

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc002370.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	56.8	5.6e-18	114	163	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr ++ +g+++AeIrdp + r+r +lg+++taeeAa+ +++a+ k++g Cse_sc002370.1_g020.1 114 KYRGVRARP-WGKFAAEIRDPAK---RARLWLGTYDTAEEAARVYDNAAIKIRG 163 8******.******843...6***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 340 aa Download sequence
MDMDFYSMSS PIKQTEHKQS LTMFVPTSTN HFSKTQNTPK VVRISVTDPY ATDSSSDEDD 60 VLFARRRVKK YVHEITIQPS CKPSVVGINN RKKTTGIQRN PMKKMKSTVN NNRKYRGVRA 120 RPWGKFAAEI RDPAKRARLW LGTYDTAEEA ARVYDNAAIK IRGPRALTNF IMPPAVKQNP 180 PARSMSESNG PSKDVVERVK EGEECQSSNG SDQGLELEKH GLGHLEDVSW LDNLFEYQDS 240 NSVIVKKELL GPSEDVPLLD DLFDFKSPEL DQKGDEASDY VMGDDLGXLD PFHFDDLGEI 300 PFGDEFNDSI FNAALPSLLE VDNYLEDIPD DFFGTEEFLK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	66	106	RRVKKYVHEITIQPSCKPSVVGINNRKKTTGIQRNPMKKMK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G27950.1	6e-48	ERF family protein