PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001894.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family B3
Protein Properties Length: 474aa    MW: 54972.9 Da    PI: 8.1338
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001894.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B333.66.8e-1128971386
                           TT-EE--HHH.HTT---..--SEEEEEETTS.-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                     B3 13 sgrlvlpkkfaeehggkkeesktltledesg.rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86
                            + + lp  f+e+h++k   s+  tl++ sg  sW+v++  ++ ++ y +++GW++ +++ +L+ +D+vvF l +
  Cse_sc001894.1_g050.1 28 PH-IALPSAFVETHSKK--MSRNPTLKTASGdYSWSVEI--KRIGEDYCFANGWEKVAQDVQLCIKDIVVFWLAD 97
                           44.88*********866..45578888988879******..******************************8654 PP
2B348.21.9e-152953761697
                            EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE CS
                     B3  16 lvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvf 97 
                            lvlp  f+++ g++  ++++++++d +g +W+v +i+ r+ + ++ l++GW++F +  +L +gD++ Fk+d++    +l++ ++
  Cse_sc001894.1_g050.1 295 LVLPQLFVRAAGLE--NKTMIKMKDYEGYEWRVGIIVeRNIRTKHSLSAGWSKFRQHCNLADGDVCFFKYDKKeGILNLTHVIR 376
                            79******999988..5569***************997777777**************************98745555555555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 474 aa     Download sequence    
MQMGSCSTSE PQQDSLSFFK VIRYPSSPHI ALPSAFVETH SKKMSRNPTL KTASGDYSWS  60
VEIKRIGEDY CFANGWEKVA QDVQLCIKDI VVFWLADAYT IQVTFFGADG EYLILHLCLA  120
LNINFMTIFK KNNSNHSSIY NFMTIFFHFH SQWEWKWKKP PTTPCELHQF QELLFQLSQV  180
NVSPAEDSWT WKHKDSNVFS VKTMNQNLQR AAFGPNQWTF PWTKLAPIKI NIFGWRLEQN  240
RIATKDQLHL RNIPIGPPHC SLCNSQDESS EHLFLWCPFA TTVWTIILQW CHLPLVLPQL  300
FVRAAGLENK TMIKMKDYEG YEWRVGIIVE RNIRTKHSLS AGWSKFRQHC NLADGDVCFF  360
KYDKKEGILN LTHVIRSKRS TTSAVDAVRI EDECSPTDKP SDGAKVSVEC ESDRELDMAQ  420
RNMGRPLLNG GTDVKIIDEW DAEAIAMRKK RRILLEKNEQ ERERVVRSNQ VIYF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01580.17e-07B3 family protein