PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001798.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 317aa    MW: 36077.3 Da    PI: 6.719
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001798.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.61.2e-171461148
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                           rgrWT+eEd++l d+++ +G g+W++ ++  g+ R++k+c++rw +yl
  Cse_sc001798.1_g020.1 14 RGRWTAEEDKILFDYIQTHGEGSWRSLPKNAGLLRCGKSCRLRWINYL 61
                           8*******************************99************97 PP
2Myb_DNA-binding52.51.1e-1667112148
                            TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                            rg+ ++eE++++ ++++ lG++ W++Ia++++ gRt++++k++w+++l
  Cse_sc001798.1_g020.1  67 RGNISKEEEQIITNLHASLGNR-WSLIAAHLP-GRTDNEIKNYWNSHL 112
                            7899******************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MGRAPCCQKI GLKRGRWTAE EDKILFDYIQ THGEGSWRSL PKNAGLLRCG KSCRLRWINY  60
LRSDVRRGNI SKEEEQIITN LHASLGNRWS LIAAHLPGRT DNEIKNYWNS HLSRKIIPSR  120
RIMSNPPTIT IPQTIIKRRG RTSRSKMKIN KTYRSSSNNN TRVVSVVPLS KGQPEQLIKQ  180
QTKPVKDGHV CMDPAPSNEN KLNDGQSHDD EIFRFIEIMD QQLMSMDPNH EYSFTERDGV  240
VTSEEETHNA SEPKSVEAGG ANSSSTVSYD DWNWDFDVED GILGLGGQEE DDILSWPWES  300
TTTDYDNILG SDAWLLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47460.16e-72MYB family protein