PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc001583.1_g080.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

CPP

Protein Properties

Length: 759aa MW: 83128.5 Da PI: 8.3896

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc001583.1_g080.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	49.6	7.9e-16	385	424	3	42
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 +k+C+CkkskClk+YC+Cfaag +Cs +C+C++C+Nk e+ Cse_sc001583.1_g080.1 385 CKRCKCKKSKCLKLYCDCFAAGIYCSGSCSCQGCFNKPEH 424 79**********************************9876 PP
2	TCR	52.3	1.1e-16	473	510	2	39
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 +kkgCnCkks ClkkYCeC++a++ Cs+ C+Ce+C+N Cse_sc001583.1_g080.1 473 HKKGCNCKKSMCLKKYCECYQANVGCSDGCRCEGCQNI 510 79***********************************5 PP

Sequence ? help Back to Top
Protein Sequence Length: 759 aa Download sequence
MENEENKKIT IAFSSSSPQS ISAFNDSPIF NYINNLSPIK PVKGSSVTQV FPGLNSPPLV 60 FTSPRTHTRR VDLKSSQSHV SSDAELSLRD NTCNITTGGN LTPLSLKNSE DVYPKMTDLM 120 TPDGSLETNV MAPAAVVEQT EQEHEGSLPS HPKPAENDGK VISITRQYAQ RVAQHQQPVF 180 GCYKDYGKGI ASGIANQPIA TVIGQQLKVG KSQLGKRRRL QFEAAQEKVV ESNPVTLNPS 240 ITTATSEVIE SSFSQNVKNS SQTVSKPSGI GLHLNSIVNA RPLMSVSIKP NDGKMSISVT 300 SHVQDNMQCP SISSNSNLAD ELSTRSEEYT HEAPYSNQKL ITMIENQESF DQGSLNYEQG 360 QRVDEFNRSN PKKKRKKGES NGDGCKRCKC KKSKCLKLYC DCFAAGIYCS GSCSCQGCFN 420 KPEHQDTVLE TRKQIESRNP LAFAPKIVQH LTQPPNSETV VDEDQVTPLA AIHKKGCNCK 480 KSMCLKKYCE CYQANVGCSD GCRCEGCQNI FGAKGANSFM FREMGMEAVN QKLNDSLDDK 540 LKVGSIRSRS SLPAIHKPHN VTPETPSFQF SNHGKDASKS HVIPGRYISS PESECTFYPE 600 MIPFDQEFMD EFSPSDSSRS QLLPSNGRSL SSLGFRGSSL VTPVTLFGGT KTSSRITDDD 660 DDTPKILRDS CIQPNKVIGT SPNKKRISPP RIRLHELGST SLKSGRKFIL KSVPSFPPLT 720 PCTNSKDVTG HTFGGDHTRT KPAFTSISKN NSNCLELDT

Sequence ? help Back to Top

Protein Sequence Length: 759 aa Download sequence

MENEENKKIT IAFSSSSPQS ISAFNDSPIF NYINNLSPIK PVKGSSVTQV FPGLNSPPLV  60
FTSPRTHTRR VDLKSSQSHV SSDAELSLRD NTCNITTGGN LTPLSLKNSE DVYPKMTDLM  120
TPDGSLETNV MAPAAVVEQT EQEHEGSLPS HPKPAENDGK VISITRQYAQ RVAQHQQPVF  180
GCYKDYGKGI ASGIANQPIA TVIGQQLKVG KSQLGKRRRL QFEAAQEKVV ESNPVTLNPS  240
ITTATSEVIE SSFSQNVKNS SQTVSKPSGI GLHLNSIVNA RPLMSVSIKP NDGKMSISVT  300
SHVQDNMQCP SISSNSNLAD ELSTRSEEYT HEAPYSNQKL ITMIENQESF DQGSLNYEQG  360
QRVDEFNRSN PKKKRKKGES NGDGCKRCKC KKSKCLKLYC DCFAAGIYCS GSCSCQGCFN  420
KPEHQDTVLE TRKQIESRNP LAFAPKIVQH LTQPPNSETV VDEDQVTPLA AIHKKGCNCK  480
KSMCLKKYCE CYQANVGCSD GCRCEGCQNI FGAKGANSFM FREMGMEAVN QKLNDSLDDK  540
LKVGSIRSRS SLPAIHKPHN VTPETPSFQF SNHGKDASKS HVIPGRYISS PESECTFYPE  600
MIPFDQEFMD EFSPSDSSRS QLLPSNGRSL SSLGFRGSSL VTPVTLFGGT KTSSRITDDD  660
DDTPKILRDS CIQPNKVIGT SPNKKRISPP RIRLHELGST SLKSGRKFIL KSVPSFPPLT  720
PCTNSKDVTG HTFGGDHTRT KPAFTSISKN NSNCLELDT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	216	220	KRRRL
2	373	377	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22780.1	1e-52	CPP family protein