PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc001199.1_g030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | NAC | ||||||||
Protein Properties | Length: 216aa MW: 24762.2 Da PI: 9.6193 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 155.7 | 2.1e-48 | 14 | 137 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 lppGfrFhPtdeelvv+yL +k+++ ++++ i+e+d+++++PwdLp e+e yfFs+ + ky++gkr+nr+t+sgyWk+tg Cse_sc001199.1_g030.1 14 LPPGFRFHPTDEELVVHYLYHKAQSLPMTI--PIPEADVCRSDPWDLPGD---LEQERYFFSTMEIKYPNGKRSNRTTTSGYWKSTGL 96 79***********************99877..8***************54...46799****************************** PP NAM 89 dkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 dk+++ + +++++g+kktLvfy+g+ p+g+kt+W+mhey+l Cse_sc001199.1_g030.1 97 DKRIIGSqNKQVIGTKKTLVFYRGKPPHGSKTSWIMHEYKL 137 ***998757888***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 216 aa Download sequence |
MTKLNFVKNG ALRLPPGFRF HPTDEELVVH YLYHKAQSLP MTIPIPEADV CRSDPWDLPG 60 DLEQERYFFS TMEIKYPNGK RSNRTTTSGY WKSTGLDKRI IGSQNKQVIG TKKTLVFYRG 120 KPPHGSKTSW IMHEYKLASH NQDMGNWVLC RMFQKKIAKN GGMKDEDQMF KVEKTRPVLY 180 EFIGGRRKFD LNLEGDVSSS SCSSGVTKAD EDEVNS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13180.1 | 6e-80 | NAC family protein |