PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc001131.1_g030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | FAR1 | ||||||||
Protein Properties | Length: 210aa MW: 25173.6 Da PI: 8.4774 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 45.3 | 2.8e-14 | 41 | 122 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.....dgkwevtklele 84 fY++YAk GFsvr +r+f C +eg++e + + +k++r+r ++r+g ka++++k+++ ++w+vt++++e Cse_sc001131.1_g030.1 41 FYQKYAKINGFSVRYG------------RRDFFCHREGTQEAKVVDYSKKQRNRGSSRCGSKAHMRIKLKRindifPKEWQVTQFVTE 116 9************987............478***************9*********************99886555689********* PP FAR1 85 HnHela 90 HnH l Cse_sc001131.1_g030.1 117 HNHVLL 122 ***986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence |
MKELAFDLNE IPNEEYVESH KEICTPFIGQ CFLSEEETFL FYQKYAKING FSVRYGRRDF 60 FCHREGTQEA KVVDYSKKQR NRGSSRCGSK AHMRIKLKRI NDIFPKEWQV TQFVTEHNHV 120 LLSTQEVCFL PSYRCITIED ENRILMLKEG GLSVRQIMRV MELERNVRHE ELSFLVKDVH 180 NFLNKFQRMH SKNDARDLLE YCKQTKIEXR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G10240.1 | 1e-43 | FAR1 family protein |