PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc000963.1_g060.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

TALE

Protein Properties

Length: 581aa MW: 64946.5 Da PI: 6.5056

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc000963.1_g060.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	26.4	1.2e-08	353	390	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ ++ LA+++gL+ +qV++WF N R + Cse_sc000963.1_g060.1 353 FEHflHPYPNDVDKHILARQTGLSRSQVSNWFINARVR 390 554459******************************88 PP
2	BELL	121.2	4.4e-39	214	285	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e++elqk+k+kLl++leeVd+rYk+y++q+++v+ssFeavag g+ak+Y slA+ka+SrhFrcL+d i++qi Cse_sc000963.1_g060.1 214 EFMELQKRKTKLLQMLEEVDRRYKHYCDQMKAVVSSFEAVAGNGAAKVYSSLASKAMSRHFRCLRDGIVNQI 285 679********************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 581 aa Download sequence
MMDSSTGNYN CYPHDDDDHN HHVNSSSNPN ATTSFETSPL GMFNFEAHNS VSHNADFYNF 60 DESSLQRCVF PCEPNERPSQ GLSLSLSSAN PSTIGLQQFE LVRPQEHHYQ NHPGYFGKSM 120 SMDQDHHHHQ DMMNQVTGDD GGYNHHQGAQ FNIRSSRYLF PAQELLNEFC NLGSKQSDHS 180 SKAKAASTTS NQCHDHDYLN NASASKSKSL SSVEFMELQK RKTKLLQMLE EVDRRYKHYC 240 DQMKAVVSSF EAVAGNGAAK VYSSLASKAM SRHFRCLRDG IVNQIKSTKV AMGEKDVSAP 300 GSSRGETPRL RVLDQTLRQQ RAFQQMTMMD NHPWRPQRGL PERSVSVLRA WLFEHFLHPY 360 PNDVDKHILA RQTGLSRSQV SNWFINARVR LWKPMVEEMY VEETKASQET MESTSDGFNP 420 NSQIDQKPTV DELVRIDSEC LSSIINHPEK MDHISHSKTQ DHRDFHHNYP RITSSFGAVE 480 LDFSTYNNHS FGGGDGSGGV SLTLGLQQNG GNGAGDGGVG AGAGVSLAFS STSQSALLYP 540 RDNNDDCQPS VQYSSLLEGD QVQNLPYRNL MGAQLLHDLA G

Sequence ? help Back to Top

Protein Sequence Length: 581 aa Download sequence

MMDSSTGNYN CYPHDDDDHN HHVNSSSNPN ATTSFETSPL GMFNFEAHNS VSHNADFYNF  60
DESSLQRCVF PCEPNERPSQ GLSLSLSSAN PSTIGLQQFE LVRPQEHHYQ NHPGYFGKSM  120
SMDQDHHHHQ DMMNQVTGDD GGYNHHQGAQ FNIRSSRYLF PAQELLNEFC NLGSKQSDHS  180
SKAKAASTTS NQCHDHDYLN NASASKSKSL SSVEFMELQK RKTKLLQMLE EVDRRYKHYC  240
DQMKAVVSSF EAVAGNGAAK VYSSLASKAM SRHFRCLRDG IVNQIKSTKV AMGEKDVSAP  300
GSSRGETPRL RVLDQTLRQQ RAFQQMTMMD NHPWRPQRGL PERSVSVLRA WLFEHFLHPY  360
PNDVDKHILA RQTGLSRSQV SNWFINARVR LWKPMVEEMY VEETKASQET MESTSDGFNP  420
NSQIDQKPTV DELVRIDSEC LSSIINHPEK MDHISHSKTQ DHRDFHHNYP RITSSFGAVE  480
LDFSTYNNHS FGGGDGSGGV SLTLGLQQNG GNGAGDGGVG AGAGVSLAFS STSQSALLYP  540
RDNNDDCQPS VQYSSLLEGD QVQNLPYRNL MGAQLLHDLA G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41410.1	1e-129	TALE family protein