PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc000454.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

TALE

Protein Properties

Length: 641aa MW: 71137.9 Da PI: 7.1409

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc000454.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.4	5.8e-09	375	412	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk++gLt qV++WF N R + Cse_sc000454.1_g020.1 375 FEHflHPYPKDSDKHMLAKQTGLTRGQVSNWFINARVR 412 554459******************************88 PP
2	BELL	118.3	3.7e-38	238	309	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 erqe+q+kkakL+++l+eV++rY+qy++q+q+vis Fe++ag+gsak Yt+lAl++iS++FrcLkdai +qi Cse_sc000454.1_g020.1 238 ERQEVQMKKAKLVNMLDEVEQRYRQYHNQMQIVISWFEQAAGIGSAKTYTALALQTISKQFRCLKDAILGQI 309 79********************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 641 aa Download sequence
MATYYNSNSE TQGGDGLQTL VLMNHGYVNY SDTQQQSQQQ PSQQGNIMFL NNHHQHTSLS 60 HTPQPTTSQT QQFVGVPLSV QPSVSIHSQQ DMSSLHAFMP RVHYNIYNPV EMTTQPHEVN 120 RFQQGLSLSL SSQQSGFGSQ AAGVATISPS SDERATGSTP SASGVSNGVQ SVLLNSKYLK 180 ATHELLEEVV NVGKDVFKNS DQSSKLLNAN GSPAAREGLS CEETNSKRGD GAELTTAERQ 240 EVQMKKAKLV NMLDEVEQRY RQYHNQMQIV ISWFEQAAGI GSAKTYTALA LQTISKQFRC 300 LKDAILGQIK TASRSLGEED SFGGKNEGGS RLKFVDNQLR QQRALQQLGM IQHNAWRPQR 360 GLPERSVSVL RAWLFEHFLH PYPKDSDKHM LAKQTGLTRG QVSNWFINAR VRLWKPMVEE 420 MYLEEIKENE QNKSDENKAT KSEQSEDNSS SKHEKSLSPE NSKRGFNHPP PPQMTVSTTI 480 STSPTATRIN FQNPSSFTLI GSSQMDGMTQ YSPKKPRNNE RQDAGFTLMG NPTDFMGSLG 540 GYQIGEIGRF NPEQFHPQYS GNGVSLTLGL PHGDNLSMSG GHQSFLPNQN IHLSRGVELG 600 ESNEFDAMSQ QPSSHSAAMY ETMNIQNQKR FGSQPLPDFV A

Sequence ? help Back to Top

Protein Sequence Length: 641 aa Download sequence

MATYYNSNSE TQGGDGLQTL VLMNHGYVNY SDTQQQSQQQ PSQQGNIMFL NNHHQHTSLS  60
HTPQPTTSQT QQFVGVPLSV QPSVSIHSQQ DMSSLHAFMP RVHYNIYNPV EMTTQPHEVN  120
RFQQGLSLSL SSQQSGFGSQ AAGVATISPS SDERATGSTP SASGVSNGVQ SVLLNSKYLK  180
ATHELLEEVV NVGKDVFKNS DQSSKLLNAN GSPAAREGLS CEETNSKRGD GAELTTAERQ  240
EVQMKKAKLV NMLDEVEQRY RQYHNQMQIV ISWFEQAAGI GSAKTYTALA LQTISKQFRC  300
LKDAILGQIK TASRSLGEED SFGGKNEGGS RLKFVDNQLR QQRALQQLGM IQHNAWRPQR  360
GLPERSVSVL RAWLFEHFLH PYPKDSDKHM LAKQTGLTRG QVSNWFINAR VRLWKPMVEE  420
MYLEEIKENE QNKSDENKAT KSEQSEDNSS SKHEKSLSPE NSKRGFNHPP PPQMTVSTTI  480
STSPTATRIN FQNPSSFTLI GSSQMDGMTQ YSPKKPRNNE RQDAGFTLMG NPTDFMGSLG  540
GYQIGEIGRF NPEQFHPQYS GNGVSLTLGL PHGDNLSMSG GHQSFLPNQN IHLSRGVELG  600
ESNEFDAMSQ QPSSHSAAMY ETMNIQNQKR FGSQPLPDFV A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35940.1	1e-137	TALE family protein