PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc000193.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | NAC | ||||||||
Protein Properties | Length: 236aa MW: 27476.9 Da PI: 8.6962 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 98.7 | 8.6e-31 | 15 | 142 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratk.sgyWka 85 l pG+rF Pt+ el+v+yLk+k+++ k + + ev+iy++ P +L + ++++ e++wyf ++r++k+++gkr+nr+tk g+Wka Cse_sc000193.1_g010.1 15 LEPGYRFCPTNVELIVYYLKPKIDTGKRHPNCRYYEVNIYDYGPDELTAkpEYRSCENKWYFLTPRQRKHPNGKRPNRKTKsGGTWKA 102 579*********************9997774569*************84356777889********************8874689*** PP NAM 86 tgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 + k+ + +++vg k+ L + ++kg+kt W+mhey+ Cse_sc000193.1_g010.1 103 SQMGKPQRDDMNRVVGSKTCLFYI---DEKGNKTAWLMHEYTT 142 *******99999999999999888...78899*********85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence |
MAYNNQEQHD YADSLEPGYR FCPTNVELIV YYLKPKIDTG KRHPNCRYYE VNIYDYGPDE 60 LTAKPEYRSC ENKWYFLTPR QRKHPNGKRP NRKTKSGGTW KASQMGKPQR DDMNRVVGSK 120 TCLFYIDEKG NKTAWLMHEY TTDNPNIPLG SQEQIEDNNM LTRWVLCKIY KKGTKPANNN 180 VGNQEEAFEE QYQQLQDEPS EVARMKKVPY ASAVGSIMYA VRCTRPDVAF AQNLTS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69490.1 | 3e-31 | NAC family protein |