PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc000117.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

CPP

Protein Properties

Length: 769aa MW: 83296.9 Da PI: 5.7828

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc000117.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	50.7	3.4e-16	483	521	2	40
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 +k+CnCkkskClk+YCeCfaag++C e C+C+dC+Nk Cse_sc000117.1_g010.1 483 ACKRCNCKKSKCLKLYCECFAAGVYCVEPCSCHDCFNKP 521 589**********************************96 PP
2	TCR	51.5	2.1e-16	566	605	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+gCnCkks ClkkYCeC++ g+ Cs +C+Ce+CkN+ Cse_sc000117.1_g010.1 566 RHKRGCNCKKSGCLKKYCECYQGGVGCSINCRCEGCKNTF 605 589***********************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 769 aa Download sequence
MKMISVVNGE NDEESEKGIV VMDTPERTQI ANPLSKFEFG VKIYEDRFAV SLQDSPVFNY 60 INSLSPIKPV KSMHFTQTFS SLSFASLPSV FTSPHVSSLR DSKFLRRHQF LDPLKPELTS 120 EDAKKAETIE GNLNTDQNSS KQQTDFIPND SNNETSAVPL NGCSNFESSK LSYDPVSLNT 180 MNTLKMVGPS ASSASFINNV SADGSLRIEG EIEGIDALHH GKEATGCDWD SMISDASELL 240 NFNSPSEMVP YKGSGQNTLD CTDYKVDGTD NNPSEKNDGM NGAPDNHQTA DSTLNNFEVG 300 EPVEDADEGG PNVFRGMRRR CLVFEMSGSR RKHFEDSSNG SSLNTSESNQ TVLPNDNNLP 360 PLSAGNDSSR CILPGIGLHL NAIASNLVDQ KVKHESSGST RQLIIGHPSG IYGSMALATL 420 DAPSLENDMG PAQNSLLVAE DASKALNFVI SEELSQSQTS PKKKRQVTYI PVVRRSDAGD 480 GEACKRCNCK KSKCLKLYCE CFAAGVYCVE PCSCHDCFNK PIHEDTVLAT RKQIESRNPL 540 AFAPKVIKTA DPMQEDELNN TPASARHKRG CNCKKSGCLK KYCECYQGGV GCSINCRCEG 600 CKNTFGRKDG SEMDLEVNPA DESEGIGSDG SLQMVLHSET EHISATPISA TPASPSRFGR 660 QSIALVKSSK GKPPRSFLAI KGSSSSQRFG TLNPFKGVEN QQLQTVGENE IPEILEGNNE 720 SPISGVKSCS PNSKRVSPPH SGGMGQRSSR KLILQSIPSF PCLTPNSKQ

Sequence ? help Back to Top

Protein Sequence Length: 769 aa Download sequence

MKMISVVNGE NDEESEKGIV VMDTPERTQI ANPLSKFEFG VKIYEDRFAV SLQDSPVFNY  60
INSLSPIKPV KSMHFTQTFS SLSFASLPSV FTSPHVSSLR DSKFLRRHQF LDPLKPELTS  120
EDAKKAETIE GNLNTDQNSS KQQTDFIPND SNNETSAVPL NGCSNFESSK LSYDPVSLNT  180
MNTLKMVGPS ASSASFINNV SADGSLRIEG EIEGIDALHH GKEATGCDWD SMISDASELL  240
NFNSPSEMVP YKGSGQNTLD CTDYKVDGTD NNPSEKNDGM NGAPDNHQTA DSTLNNFEVG  300
EPVEDADEGG PNVFRGMRRR CLVFEMSGSR RKHFEDSSNG SSLNTSESNQ TVLPNDNNLP  360
PLSAGNDSSR CILPGIGLHL NAIASNLVDQ KVKHESSGST RQLIIGHPSG IYGSMALATL  420
DAPSLENDMG PAQNSLLVAE DASKALNFVI SEELSQSQTS PKKKRQVTYI PVVRRSDAGD  480
GEACKRCNCK KSKCLKLYCE CFAAGVYCVE PCSCHDCFNK PIHEDTVLAT RKQIESRNPL  540
AFAPKVIKTA DPMQEDELNN TPASARHKRG CNCKKSGCLK KYCECYQGGV GCSINCRCEG  600
CKNTFGRKDG SEMDLEVNPA DESEGIGSDG SLQMVLHSET EHISATPISA TPASPSRFGR  660
QSIALVKSSK GKPPRSFLAI KGSSSSQRFG TLNPFKGVEN QQLQTVGENE IPEILEGNNE  720
SPISGVKSCS PNSKRVSPPH SGGMGQRSSR KLILQSIPSF PCLTPNSKQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	462	493	KKKRQVTYIPVVRRSDAGDGEACKRCNCKKSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22780.1	1e-141	CPP family protein