PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc000098.1_g040.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MYB | ||||||||
Protein Properties | Length: 228aa MW: 26954.6 Da PI: 8.8237 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 58.4 | 1.6e-18 | 10 | 57 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd ll++ v+++G g+W+++a+ g++R +k+c++rw +yl Cse_sc000098.1_g040.1 10 KGPWTAEEDRLLIEHVQLHGEGRWNSVASLAGLKRNAKSCRLRWVNYL 57 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 52.9 | 8.7e-17 | 63 | 107 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr T+ E+++++++++++G++ W+tIar ++ gRt++++k++w+++ Cse_sc000098.1_g040.1 63 RGRITPLEEKIILELHARWGNR-WSTIARSLP-GRTDNEIKNYWRTH 107 899*******************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 228 aa Download sequence |
MEEQLGFWRK GPWTAEEDRL LIEHVQLHGE GRWNSVASLA GLKRNAKSCR LRWVNYLRPD 60 LKRGRITPLE EKIILELHAR WGNRWSTIAR SLPGRTDNEI KNYWRTHFKN KGKNNIHDST 120 KLQARLLKRQ KFHQEQQRQL QLQKNEEDMK KVLSILDESD NKVVHEDTQS VLYPIMFNDS 180 HYMVETSMND QDFVNLWDGL WNLEDVHDVT TKGCGPCGQN LAMSMPFF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G24310.1 | 9e-72 | MYB family protein |