PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000092.1_g140.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family HB-other
Protein Properties Length: 263aa    MW: 28994.9 Da    PI: 8.1455
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000092.1_g140.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox65.85.8e-2161116156
                            TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
               Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                            ++  +++t++q++eLe lF+++++p++++r eL+++l L++rqVk+WFqNrR+++k
  Cse_sc000092.1_g140.1  61 KKGYHRHTPQQIQELEVLFKECPHPDEKRRLELSRRLCLETRQVKFWFQNRRTQMK 116
                            5778899**********************************************999 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MEGGGGVGEM GRMPENYETS GGVGGRRIRE DEHESRSGSD NMDGCGSGDD PDGDDGKRPR  60
KKGYHRHTPQ QIQELEVLFK ECPHPDEKRR LELSRRLCLE TRQVKFWFQN RRTQMKTQLE  120
RHENSILMQE NNNLLAENMS IRGAMRNPIC TDCGIGDISL KEQHLRLENA RLKDELDRVC  180
ALAGKFLGRP VSSMGPPMPN SSLELGVGGT HFGGITSYSP IKYFGLDKPG KKVGVVGLGG  240
VGHVAVKMAK AFGIEVTVFG TSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.21e-69HD-ZIP family protein