PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc000018.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | ERF | ||||||||
Protein Properties | Length: 177aa MW: 19243.6 Da PI: 10.4637 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.8 | 1.5e-19 | 120 | 169 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+W+AeIrdp + +r++lg+f tae Aa+a+++a+ +++g Cse_sc000018.1_g020.1 120 NYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFETAEAAARAYDRAAIEFRG 169 59*******.**********7.....337************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 177 aa Download sequence |
MDNRLTNKFN QQASTSFHHQ QPQPPPWRRL TTDEEVAVMV ATLRNVISGS TDSLSIFQVP 60 NPQTCRVCGI SGCLGCNFFT HDNNHSNVGA GAGAGVAVQT EAGVGAEAGA GGPIRKKKKN 120 YRGVRQRPWG KWAAEIRDPH KAARVWLGTF ETAEAAARAY DRAAIEFRGA RAKLNFP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34410.1 | 8e-31 | ERF family protein |