PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62043235-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NAC
Protein Properties Length: 266aa    MW: 30083.4 Da    PI: 4.632
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62043235-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM122.73.1e-388107199
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                     +ppGfrFhPtdeelv +yLkkkv+++k++l +vi+++d+y++ePwdL+      ++e++ewyfFs++dkky+tg+r+nrat +g+Wkatg+dk+v
  AUR62043235-RA   8 VPPGFRFHPTDEELVGYYLKKKVASQKIDL-DVIRDIDLYRIEPWDLQDrcrIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAV 101
                     69****************************.9***************953432234667************************************ PP

             NAM  93 lskkgel 99 
                     ++ k++l
  AUR62043235-RA 102 YD-KSKL 107
                     *9.4444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MDTLESCVPP GFRFHPTDEE LVGYYLKKKV ASQKIDLDVI RDIDLYRIEP WDLQDRCRIG  60
YEEQNEWYFF SHKDKKYPTG TRTNRATMAG FWKATGRDKA VYDKSKLIEI ESEALLAANY  120
SLITDTFLQL PQLESPLSTK RTISIVSQNN NNSSNSTTTT IGEINNMNKA SKVTDWRELD  180
QFVASQLSQD PKTLDDHDQS LNRHLSSFSH TSDLEALLLL HGGDEREEEV IDAGKLISGF  240
ISTSSSADSD NIGICIFDKL NQDIN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18060.11e-72NAC family protein