PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62041539-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NAC
Protein Properties Length: 557aa    MW: 61749.8 Da    PI: 4.3587
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62041539-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM172.81e-53111381128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                     l+pGfrFhPtdeelv++yL++kv+gk++++ ++i+e+diykveP+dLp  +k+k+++ ewyfFs  d+ky +g r+nrat++gyWk+tgkd++v+
  AUR62041539-RA  11 LAPGFRFHPTDEELVWYYLRRKVSGKPFRV-DAISEIDIYKVEPSDLPglSKLKSRDLEWYFFSALDRKYGNGLRTNRATNEGYWKTTGKDRPVY 104
                     579***************************.99***************6448888888************************************* PP

             NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     + k+++vg+kktLv++kgrap+ge+t+Wvmhey+l
  AUR62041539-RA 105 H-KSRVVGMKKTLVYHKGRAPRGERTNWVMHEYKL 138
                     *.999****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 557 aa     Download sequence    
MGRNSSASTS LAPGFRFHPT DEELVWYYLR RKVSGKPFRV DAISEIDIYK VEPSDLPGLS  60
KLKSRDLEWY FFSALDRKYG NGLRTNRATN EGYWKTTGKD RPVYHKSRVV GMKKTLVYHK  120
GRAPRGERTN WVMHEYKLND DVLEKAGYMP EGFVLCRVFQ KSGTGPKNGE KYGAPLVEEE  180
WEDDSLEDVV PAEVSFEDPY VDDDAYIEQN DLEQVVDCQL PANVPFPVSF NPVDSNYYLE  240
CSHNVTGAEQ ASVVGESEGK CSLQVLDGQE FYDLGQDENT AFLVKNEHMA QPNDLSNQAP  300
GDLLDDLLSG NAPPEDGLFL DAVDFLEPVQ EDTHDFDVLG SYLEDDFDIG PYLNFDSSPE  360
QISIDADQSF SFKQNMIDTT WQVPSGSQLN ETGDVDDVAS SSKQFMVNSK AKPSKTDIQY  420
PFLSQANRFL GNIPAPSAFA SELPSKDVAA RLSAAVQAST AQNVTAGMIR IRDMPIGVSR  480
SGLAGLHWSF DKTGNVNVLL SFDFLEAVNP VGLESLTGLL SSKISTATSH GWLSFMFFLF  540
FAFAASVKVG LYIYAK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.11e-122NAC family protein