PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62041419-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

HSF

Protein Properties

Length: 509aa MW: 55875.1 Da PI: 4.4395

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62041419-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	75.2	1.1e-23	93	178	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+y+++ed++l+ +isw ++g+sfv++d+ +fa+ vLp+ Fkh+nf+SF gF+kv+ ++ weF+++ F +g+++ll++ AUR62041419-RA 93 FLSKTYDLVEDPNLDMIISWGSRGESFVIWDPVDFARLVLPRNFKHNNFSSF-------GFRKVDPDK---------WEFANEGFLRGSRQLLKN 171 9************************************************9.......9*999.........************** PP XXXXXXX CS HSF_DNA-bind 97 ikrkkse 103 i+r+ks+ AUR62041419-RA 172 IHRRKST 178 **987 PP

Sequence ? help Back to Top
Protein Sequence Length: 509 aa Download sequence
MFLPEIPTSS SAPIPSGSTS TSSFDPSSVF SEPFYSTGFD SMTSSNININ FQGFYSPPPP 60 TLPSLPAVFA AESETEQKPQ PLECLQGTPI PPFLSKTYDL VEDPNLDMII SWGSRGESFV 120 IWDPVDFARL VLPRNFKHNN FSSFGFRKVD PDKWEFANEG FLRGSRQLLK NIHRRKSTQS 180 QQLTPYGGSS SSESGIGSEI EKLKKEKSAL MQEVVELQEQ QRGTAEHVER VKDKIQASEQ 240 RQKQMVSFLA KVLQNPVFVD RLKQMKEQRS IVSPKTRRNF LKQAHQEAGS SGTSLEGQIV 300 KYKPEFEEWR KFPSSDIPMT SAQDYLLQDV MGMSSSGALS VPFQSEAVPL DEPAAAQEFM 360 EIPSSVGAGL LSSGIGDPFS RGQVAAPQSE AAGDYFVSFP EELVRQKTFP ESSSPAIGNI 420 KQEEVWSMGF DLSTDVSSST PAFWGNVASY DIPDVVTSCP GEFSDVFDLG SLQAGGTGIE 480 NWLDDDSSPG HPENEGFESK DNVPRTNS*

Sequence ? help Back to Top

Protein Sequence Length: 509 aa Download sequence

MFLPEIPTSS SAPIPSGSTS TSSFDPSSVF SEPFYSTGFD SMTSSNININ FQGFYSPPPP  60
TLPSLPAVFA AESETEQKPQ PLECLQGTPI PPFLSKTYDL VEDPNLDMII SWGSRGESFV  120
IWDPVDFARL VLPRNFKHNN FSSFGFRKVD PDKWEFANEG FLRGSRQLLK NIHRRKSTQS  180
QQLTPYGGSS SSESGIGSEI EKLKKEKSAL MQEVVELQEQ QRGTAEHVER VKDKIQASEQ  240
RQKQMVSFLA KVLQNPVFVD RLKQMKEQRS IVSPKTRRNF LKQAHQEAGS SGTSLEGQIV  300
KYKPEFEEWR KFPSSDIPMT SAQDYLLQDV MGMSSSGALS VPFQSEAVPL DEPAAAQEFM  360
EIPSSVGAGL LSSGIGDPFS RGQVAAPQSE AAGDYFVSFP EELVRQKTFP ESSSPAIGNI  420
KQEEVWSMGF DLSTDVSSST PAFWGNVASY DIPDVVTSCP GEFSDVFDLG SLQAGGTGIE  480
NWLDDDSSPG HPENEGFESK DNVPRTNS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03720.1	2e-79	HSF family protein